Vibrio cholerae O1 MJ-1236: VCD_003738
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Entry
VCD_003738 CDS
T00903
Name
(GenBank) TetA
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
vcj
Vibrio cholerae O1 MJ-1236
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcj02000
]
VCD_003738
01504 Antimicrobial resistance genes [BR:
vcj01504
]
VCD_003738
Transporters [BR:
vcj02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
VCD_003738
Antimicrobial resistance genes [BR:
vcj01504
]
Gene variants
Tetracycline resistance genes
Transporters
VCD_003738
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_3
MFS_1_like
Nuc_H_symport
LacY_symp
TRI12
PROL5-SMR
Motif
Other DBs
NCBI-ProteinID:
ACQ61894
LinkDB
All DBs
Position
1:3048365..3049639
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AA seq
424 aa
AA seq
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MSTNLSVIKNPRVQSDQRRLVRRPDVKPNRPLIVILSTVALDAVGIGLIMPVLPGLLRDL
VHSNDVTAHYGILLALYALMQFACAPVLGALSDRFGRRPVLLVSLAGAAVDYAIMATAPF
LWVLYIGRIVAGITGATGAVAGAYIADITDGDERARHFGFMSACFGFGMVAGPVLGGLMG
GFSPHAPFFAAAALNGLNFLTGCFLLPESHKGERRPLRREALNPLASFRWARGMTVVAAL
MAVFFIMQLVGQVPAALWVIFGEDRFHWDATTIGISLAAFGILHSLAQAMITGPVAARLG
ERRALMLGMIADGTGYILLAFATRGWMAFPIMVLLASGGIGMPALQAMLSRQVDEERQGQ
LQGSLAALTSLTSIVGPLLFTAIYAASITTWNGWAWIAGAALYLLCLPALRRGLWSGAGQ
RADR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaacttatcagtgataaagaatccgcgcgttcaatcggaccagcggaggctg
gtccggaggccagacgtgaaacccaacagacccctgatcgtaattctgagcactgtcgcg
ctcgacgctgtcggcatcggcctgattatgccggtgctgccgggcctcctgcgcgatctg
gttcactcgaacgacgtcaccgcccactatggcattctgctggcgctgtatgcgttgatg
caatttgcctgcgcacctgtgctgggcgcgctgtcggatcgtttcgggcggcggccggtc
ttgctcgtctcgctggccggcgctgctgtcgactacgccatcatggcgacggcgcctttc
ctttgggttctctatatcgggcggatcgtggccggcatcaccggggcgactggggcggta
gccggcgcttatattgccgatatcactgatggcgatgagcgcgcgcggcacttcggcttc
atgagcgcctgtttcgggttcgggatggtcgcgggacctgtgctcggtgggctgatgggc
ggtttctccccccacgctccgttcttcgccgcggcagccttgaacggcctcaatttcctg
acgggctgtttccttttgccggagtcgcacaaaggcgaacgccggccgttacgccgggag
gctctcaacccgctcgcttcgttccggtgggcccggggcatgaccgtcgtcgccgccctg
atggcggtcttcttcatcatgcaacttgtcggacaggtgccggccgcgctttgggtcatt
ttcggcgaggatcgctttcactgggacgcgaccacgatcggcatttcgcttgccgcattt
ggcattctgcattcactcgcccaggcaatgatcaccggccctgtagccgcccggctcggc
gaaaggcgggcactcatgctcggaatgattgccgacggcacaggctacatcctgcttgcc
ttcgcgacacggggatggatggcgttcccgatcatggtcctgcttgcttcgggtggcatc
ggaatgccggcgctgcaagcaatgttgtccaggcaggtggatgaggaacgtcaggggcag
ctgcaaggctcactggcggcgctcaccagcctgacctcgatcgtcggacccctcctcttc
acggcgatctatgcggcttctataacaacgtggaacgggtgggcatggattgcaggcgct
gccctctacttgctctgcctgccggcgctgcgtcgcgggctttggagcggcgcagggcaa
cgagccgatcgctga
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