Vibrio cholerae O1 MJ-1236: VCD_003766
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Entry
VCD_003766 CDS
T00903
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vcj
Vibrio cholerae O1 MJ-1236
Brite
KEGG Orthology (KO) [BR:
vcj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcj03016
]
VCD_003766
Enzymes [BR:
vcj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
VCD_003766
Transfer RNA biogenesis [BR:
vcj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VCD_003766
Prokaryotic type
VCD_003766
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
ACQ61922
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All DBs
Position
1:complement(3080448..3081386)
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AA seq
312 aa
AA seq
DB search
MARRRKGRVIHGVILLDKPTGISSNDALQKVKRLYGAEKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKRYRVIAKLGERTDTSDSDGQVVQTRPVHVDYDTLLACIAKFRGETDQ
VPSMFSALKYQGRPLYEYARQGIEVPREARKITVYEIELHRFEGDEVEMEVHCSKGTYIR
TIVDDLGEMLGCGAHVTMLRRVGVANYPYERMVTLEQLNALVEQAHRDEKAVADVLDPLL
LPMDTAVEALPEVNVIPELMTLIQHGQAVQVSGAPSDGMVRITGGEQKLFLGVGEIDDNG
KVAPKRLVVYGE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgacgtaaaggtcgggttatccacggtgtgattctgttggataagccgaca
ggtatctcttccaacgacgctttgcaaaaggttaaacgcctctatggcgctgaaaaagcg
ggacatactggcgcgcttgatcctctggcgacgggcatgttgccaatctgcctcggtgaa
gccactaagttttcccaatttctgctcgattctgataaacgttatcgtgtgatcgccaaa
ttgggtgaacgtaccgacacctcagattctgatggtcaagtggtacaaacgcgtcctgtt
cacgtggattacgatacgctgctggcctgtatcgccaagtttcgcggtgaaacggatcaa
gttccatccatgttttcagcgttgaaataccaaggtcgtccactctacgaatacgcccgt
cagggtattgaagtgccgcgtgaagcgcgcaagatcactgtgtatgagattgagctgcat
cgctttgaaggtgatgaagtggagatggaagtacactgctcgaaaggcacttatattcgt
accatagtcgatgatctgggtgaaatgctgggctgtggagcgcatgtgaccatgctgcgc
cgtgtgggtgtcgctaactatccgtatgagcgaatggtgacgctagagcaactcaacgct
ttggttgaacaagcccatcgtgacgaaaaagcggtggcggacgttctcgatccgctatta
ctgccgatggatactgccgtggaagctttacccgaagtcaacgtgatcccagaactgatg
acacttattcagcatgggcaagcagtacaggtttcgggggcaccatccgacggtatggtg
cgcattactggcggcgagcagaagctattccttggcgttggcgagattgacgataacggt
aaggtcgcgccgaaacgcttggtggtgtacggcgaataa
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