KEGG   Vibrio cholerae O1 MJ-1236: VCD_003788
Entry
VCD_003788        CDS       T00903                                 
Name
(GenBank) chitin catabolic cascade sensor histidine kinase ChiS
  KO
K19694  two-component system, sensor histidine kinase ChiS
Organism
vcj  Vibrio cholerae O1 MJ-1236
Brite
KEGG Orthology (KO) [BR:vcj00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:vcj01001]
    VCD_003788
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:vcj02022]
    VCD_003788
Protein kinases [BR:vcj01001]
 Histidine kinases
  Other
   VCD_003788
Two-component system [BR:vcj02022]
 Other families
  Unclassified
   VCD_003788
SSDB
Motif
Pfam: Response_reg HATPase_c HisKA HAMP PAS_8 PAS PAS_9 HATPase_c_2 B12-binding PAS_4 HATPase_c_3
Other DBs
NCBI-ProteinID: ACQ61944
LinkDB
Position
1:3108296..3111685
AA seq 1129 aa
MFRFYRKQKFKRLQNTLMAAFLALSIIPLTITALFFLHSHSKDLEQQSTSYLVSVRDNKQ
QQVIDYMMAKESEVMGFVRSELAYASGGRFYGLVNAFQRLDVSIEAAREHAQQRYITGSG
DQIKTSVLPQSSSYVGSERYRLLHKRYHWAYLELLKRSDFDDILLVDIDGNVVYSIYKYD
NFGTNLLTGKYQDTNLGHTFKRLEQTVNEQRKTNEDFTPVVISDFVQEDGKQYAWLGAPI
IQQGYLHSYAMFRLPSNAITKLIAEGSSNPSMQTILVGQDHRSRTLTSAEIAVEKSKAVV
DLALSGKRAVGTYTNTDGEQIIAAYAPINLKNIHWALVVELPEKEAFARVRQLEKLFVFA
MLTAIVLVVIASHYLSNFITSPLLKLTWAAERVSAGDLDEAMINTERKDEIGRLAVSFER
MQRSIREKISLIKSQNKELESNLLIIRKQNDELQLANKLKDEFLATTSHELRTPLHGMIG
IAEALISGANGPISAAHKYQLDIIISSGQRLATLVDDLLDYHKMRYGALDIQRCAVDLSS
ATRLVLELSHHLLGKKTLRIINQVSEQPVWVSADPQRLEQVLYNLIGNAIKYTSEGKIVI
SATYIDDKVRVQVVDTGQGIPAEQLEHIFEPLIQAGHDASRYRQGAGLGLSISRQLIELM
HGTLYVSSQPMVGTTFSFTLPLASEEEIAQARLTELPHFQAPEVLDSELPEQSNLPENEH
GPLLLVADDEPVNLRVLDSFLRLEGYRVHTAQDGHQVLEAIKREKPELVLLDIMMPGMSG
YQVCEKLRQTYDHAELPIIMLTALNQSDDRVRGFEAGANDYLSKPFNKQELAARIVAHLT
ASKAELRRIENAQLQKELKHRAMVEASLLETQGRLLEQLESAPEAILCVKEGNKVRFANE
AAARLFRRTPEQLKRSNAEELIAPKFLNIEQEHYCGNIDVYVDDVRQHLSADVLRLPQGS
GLQAMYIFNVGGSVNAARIHNLETAVEALSSYAFEGDKDKLQKLKELGGEFTRLADKASG
EYQSKQDLMRAVLVEAMTSALNYWERVSGQSKFTFAEQSGLWRVYLDRSTLQTRTLDKYL
RIETLPKTPRWRTVLNSLDYILEHCKEAGPERTHIEMQRDKLQKLLTSE
NT seq 3390 nt   +upstreamnt  +downstreamnt
atgtttaggttctatcgaaaacaaaaattcaaacgcctgcaaaataccttgatggctgcg
tttttggccctcagcattattcctttgaccattactgcgttgtttttcctacattcacac
agtaaagatctggagcagcagagcacttcttacctcgtttctgttcgggataataaacag
caacaggtcatcgactacatgatggccaaagagtcggaagtgatgggttttgttcgctcc
gagctggcttatgccagtggcgggcgtttttatggtctggtgaatgctttccagcgttta
gacgtcagtattgaagcggctcgtgaacatgctcagcagcgctatatcaccggatcgggt
gaccaaataaaaacctcggtgctcccccaatcaagcagctacgtgggcagtgaacgctat
cgactgctgcataaacgctaccactgggcttacttagaactgctgaaacggtcggacttt
gatgacattttattggtcgatattgatggcaacgtcgtttattcgatttataaatacgac
aattttggcaccaacttattaacgggcaaataccaagacaccaatctaggccataccttc
aagcgtttagaacaaacggtcaatgaacagcgcaaaaccaacgaagatttcacccctgtc
gtgatttctgatttcgtacaagaggatggtaaacaatacgcttggcttggcgcaccgatt
attcagcaaggctacttgcatagttacgcgatgttccgcttaccaagcaatgcgatcacc
aaactcatcgcagaaggcagtagcaatccttcgatgcaaaccattctagtgggacaagat
caccgctcaagaaccttaacttccgccgaaattgcggttgaaaaaagtaaagctgtggtc
gatttagccttatcgggcaaacgcgccgtaggcacttacaccaataccgatggtgaacag
atcatcgcggcctacgcaccgatcaatttgaaaaatatccattgggctctggtggttgaa
ctgccagagaaagaagcgtttgctcgcgttcgtcagttagagaaactgtttgtttttgcg
atgttgacggctatcgtcttagtggtcatcgcctcgcattacctttccaatttcattacc
tcaccgcttttgaagctgacatgggcagccgaacgtgtttcggcaggcgatcttgatgaa
gccatgatcaataccgaacgcaaagatgaaattggccgcttggcggtcagttttgagcgt
atgcagcgttccattcgcgaaaaaatatcgctgatcaaatcgcaaaataaagagttagag
agcaacttactgatcattcgtaagcaaaacgatgagttacagctagcgaataagctaaaa
gatgagttcctcgcgaccacatcacatgaattacgcaccccattgcatggcatgattggt
attgccgaagccctgatctcgggggcaaatggcccgatttcagcagcgcacaagtatcaa
ctcgacatcattatcagcagtgggcagcgcttggcgactctggttgatgatctactcgat
taccacaaaatgcgctatggcgcgctggatattcaaaggtgtgccgtcgatttatcgagc
gctacgcgcttagtcttggagctttctcaccatttacttggcaagaaaacgctgcgcatt
attaatcaagtctcagaacaaccggtctgggtttctgcggatcctcaacgcttagagcaa
gtcctgtataacttgatcggcaatgccattaagtacacttccgaaggcaaaattgttatc
tccgcaacctatattgacgataaagtgcgcgtgcaggtggtggatacaggtcaagggatt
ccggcagaacaactggagcacatctttgagccattgattcaagcgggccatgatgcgagt
cgctatcgccaaggcgcaggactcgggctttccatcagtcgtcagttaatcgaattgatg
cacggcactctctacgtaagtagtcagccgatggttggcactacctttagcttcacgctg
cctctggcgagcgaagaagagattgctcaagcgcgcttgaccgaactcccccacttccaa
gcaccggaagtgttggattctgaactgcccgagcaaagcaacttacccgaaaatgaacat
ggcccacttctgttggtcgccgatgatgaaccagtcaacctgcgtgtgctggacagcttt
ttacgtcttgaaggttatcgcgtacataccgcgcaagatggccatcaagtacttgaagca
attaaacgtgaaaaacctgaattggtgttactcgacatcatgatgccaggcatgagcggt
tatcaagtgtgtgaaaaacttcgacaaacttacgaccacgctgaactgcctattattatg
ctgacggctctcaaccagtctgatgaccgggtacgagggtttgaagctggagccaatgac
tacttatccaaaccattcaacaaacaagagctggccgcgcgcattgtcgctcacctcacg
gcgagcaaagccgaactgcgccgcattgagaatgcccaactgcaaaaagagttgaaacat
cgcgctatggtagaagcgagcctattggaaacccaaggccgattattggaacagttagaa
tctgcgccagaagcgattttgtgcgttaaagagggcaataaagtacgttttgctaacgaa
gcggcagcacgtttatttagacgtacccctgagcagctcaaacgctccaacgccgaagaa
ctgattgctcctaaattcttgaatattgagcaagagcattactgcggcaatattgatgtt
tacgtagatgatgtgcgccagcacctctctgccgatgtccttcgcttgccgcaaggttct
ggcttacaagcgatgtacatttttaatgtcggcggcagcgtcaatgccgcgcggattcat
aacctcgaaaccgcggtagaagccctgtctagctatgccttcgaaggcgataaagacaag
ctgcaaaaactcaaggaactgggtggtgagtttactcgtcttgcagataaagcctcgggc
gagtatcaatcgaaacaagatttgatgcgtgccgtgttagtcgaagccatgaccagtgcc
ttgaactattgggaacgagtctcagggcaaagcaagttcacgtttgccgaacaaagtggc
ttgtggcgcgtttatcttgaccgcagcaccctacaaactcgtaccctagacaaatactta
cgaattgagacactgcctaaaacaccgcgttggcgaaccgtactgaactcgctcgactac
attcttgagcattgcaaagaagcaggccctgaacgcactcacatcgaaatgcagcgcgat
aaattgcaaaaactcctgaccagtgaataa

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