Vibrio chaetopteri: PG915_00710
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Entry
PG915_00710 CDS
T10904
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
vck Vibrio chaetopteri
Brite
KEGG Orthology (KO) [BR:
vck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vck03032
]
PG915_00710 (gyrB)
03400 DNA repair and recombination proteins [BR:
vck03400
]
PG915_00710 (gyrB)
Enzymes [BR:
vck01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PG915_00710 (gyrB)
DNA replication proteins [BR:
vck03032
]
Prokaryotic type
DNA Topoisomerases
PG915_00710 (gyrB)
DNA repair and recombination proteins [BR:
vck03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PG915_00710 (gyrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
GyrB_hook
HATPase_c
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
XCD16158
UniProt:
A0AAU8BJP0
LinkDB
All DBs
Position
1:complement(150669..153086)
Genome browser
AA seq
805 aa
AA seq
DB search
MSENYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGHCSDII
VTIHEDNSVSVSDDGRGIPTEMHPEEQVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSKQVTLTIHRGGHTHTQTYHHGEPQAPLAVIGDTDKTGTEIRFWPSEETFSNVE
FHYDILAKRLRELSFLNSGVSIKLVDKREEDKMDHFMFEGGIQAFVEHLNTNKTPIIQKI
FHFDFEREDGITVEVAMQWNDGYQENIYCFTNNIPQRDGGTHLAGFRAALTRTLNSFMDK
EGFSKKAKTATSGDDAREGLTAIVSVKVPDPKFSSQTKDKLVSSEVKSAVESAMGEKLSE
FLVENPGEAKIVCTKIIDAARARDAARKAREMTRRKGALDLAGLPGKLADCQEKDPALSE
LYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG
RDEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPELIERGYVYIAQPPLYKVKK
GKQEQYIKDEDAMNQYQVSLALDNAALHVNPEAPALAGESLEKLVQQFNGAVKIADRMAR
RYPHALVSEFMYTPRLTAEQCHDAVAVEAWSKQLVEQLNAKEVGASQYSFEVEQHAELGL
NLPKIIVRTHGVTHEHVLSIDLLNSKEYGKLASLSEALEGLIEEGAYVKRGERTQPVSHF
EDALNWLIKESRRGLSLQRYKGLGEMNPDQLWETTMDPETRRMMQVTIEDAVGADQLFTT
LMGDQVEPRRNFIEENALKVANLDV
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaattacgattcatcgagtattaaggtactaaagggtctggatgcagtacgt
aagcgtccgggaatgtacatcggcgacacggacgatggaaccggtctacaccacatggtt
tttgaggtggttgataactcaattgatgaagcgttggcaggtcactgtagcgacattatc
gtgactatccatgaggacaactctgtttctgttagcgatgatggccgtggtattccaacg
gaaatgcacccagaagagcaagtgtctgcggcagaagttatcatgacggtacttcacgcg
ggtggtaagttcgatgacaactcgtacaaggtatcgggtggtctgcacggcgtaggtgtt
tctgtagtaaacgcactgtctaagcaagtcacactgactatccatcgtggcggtcacact
catactcaaacttatcaccacggtgagccacaagcgccactggctgtgattggtgatacc
gacaaaacaggtacagaaatccgtttctggccaagtgaagaaactttttcaaacgtagag
ttccactacgacattcttgctaagcgtctacgtgaactgtcgttcctaaactcaggtgtc
tcaatcaagcttgtcgataagcgtgaagaagacaaaatggatcacttcatgtttgaaggt
ggtatccaagcgtttgttgagcatctaaataccaataagacaccaatcatccaaaaaatc
ttccattttgattttgagcgtgaagatggcatcaccgtagaagtggcgatgcagtggaat
gatggctaccaagaaaacatttactgttttaccaacaacatccctcaacgtgatggtggt
actcacttagcgggtttccgtgccgcattaacgcgtacgctgaactcgttcatggataaa
gagggcttctctaagaaagccaagacagcgacatcaggtgatgatgctcgtgaaggtcta
acagctatcgtatcggtgaaagtgccagatccgaagttctcaagccaaaccaaagacaag
ctggtttcttctgaagtgaaatctgccgttgagtctgcgatgggtgagaagctgtctgag
ttcctagtagagaacccaggtgaagcgaagattgtttgtactaagattattgatgctgct
cgcgcacgtgatgcagcgcgtaaagcgcgtgaaatgacacgtcgtaaaggcgctctagac
ctagcgggtctgccaggcaaactggctgactgccaagagaaagatccagcgctttctgaa
ctgtacatagtggagggtgactctgcgggcggtagtgctaagcagggtcgtaaccgtaag
aaccaagcgattcttccactgaaaggtaagatcctaaacgtagagaaagcgcgtttcgat
aagatgctttcttcacaagaagtggcaacgcttatcacagcacttggctgtggtatcggt
cgcgatgagtacaacccagataaactgcgttaccacaacatcatcatcatgaccgatgcg
gacgtcgatggttctcacatccgaacgctacttttgaccttcttctaccgtcaaatgcct
gagcttatcgagcgtggttacgtgtacatcgctcagccaccgctttacaaagtgaagaaa
ggtaagcaagagcagtacatcaaagatgaagatgcgatgaaccagtaccaagtttctttg
gctctggataacgctgctctgcacgtgaaccctgaagcaccagcactagcaggtgaatca
ctagagaaactggtacagcagttcaacggcgcagtgaagattgccgatcgcatggctcgt
cgctacccacacgcactagtgagtgagttcatgtacacgccacgcctaacggctgagcag
tgtcacgatgctgttgcggttgaagcatggtctaagcagcttgttgagcagctaaatgcc
aaagaagtgggtgcaagccaatacagcttcgaggttgaacagcacgctgagctaggtttg
aacctaccgaaaattatcgtgcgtacccacggtgtgactcatgagcatgtgctgagtatc
gacctgctgaactcgaaagagtacggcaagctagcatctctatcggaagctctagaaggt
ctgattgaagaaggtgcttacgtgaaacgtggtgagcgtactcaaccagtgagccacttt
gaagatgccctaaattggctaatcaaagagtcgcgtcgtggtctgagcctacagcgctac
aaaggtctaggtgagatgaacccagatcagctttgggaaaccacaatggatcctgaaaca
cgtcgcatgatgcaagtaacgattgaagatgcggttggtgcagatcagctgttcacgaca
ctaatgggtgaccaagtagagcctcgtcgtaacttcattgaagaaaacgcacttaaagta
gccaacctagacgtttag
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