Vibrio chaetopteri: PG915_01405
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Entry
PG915_01405 CDS
T10904
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
vck Vibrio chaetopteri
Brite
KEGG Orthology (KO) [BR:
vck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vck03021
]
PG915_01405 (rpoH)
Transcription machinery [BR:
vck03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PG915_01405 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
HTH_25
KORA
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
XCD16273
UniProt:
A0AAU8BIT4
LinkDB
All DBs
Position
1:287181..288038
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AA seq
285 aa
AA seq
DB search
MANQAYPMALVTQDSLDSYIRSVNSYPMLTADEERELAERLHYDGEIDAAKGLILSHLRF
VVHVARGYSGYGLPMADLVQEGNIGLMKAVKRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKIATTKAQRKLFFNLRKSKKRLGWFNNGEVETVAKELGVEPAEVREMESRLAAQDP
AFEMPSDDDEAGTTYTAPALYLEDKSSDLAEDYEAQNWEAHTNNRLGHALATLDERSQHI
VRSRWLDDNKSTLQDLADNYGVSAERIRQLEKNAMKKLKAAVGEF
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccaagcgtatccaatggctttagtaacacaagatagcttagacagctacatc
cgctcagtgaacagctacccaatgctgaccgctgatgaggagcgtgaactagcagaaaga
ttgcattacgacggtgagattgatgcggcgaaagggctcatcttgtcacaccttcgcttt
gttgttcacgtcgctcgtggctattcaggttacggcctgcctatggcggatctggtgcaa
gagggcaacattggtctgatgaaggcggtaaaacgctttaacccagaagttggggtaaga
ctggtgtcgtttgcagtacattggatcaaagctgaaatccatgagtacgtgttgcgtaac
tggcgtattgttaagattgcgaccacaaaagcgcagcgcaaattgttcttcaacctacgt
aagtccaagaagcgtcttggttggtttaataacggtgaagtggaaacggtcgcaaaagag
ctgggtgtagaaccagctgaagttcgcgagatggaatcacgtttagccgcgcaagaccca
gcgtttgaaatgccaagcgatgacgatgaagcgggtaccacatatacggcgcccgcgctg
tacctagaagacaaaagctcagatcttgctgaagactacgaagctcaaaactgggaagcg
cacactaataaccgtcttggtcatgcactggcgacactggatgagcgtagccaacatatc
gttcgctctcgttggttagatgacaacaagtcgacgctacaagacttagccgataactac
ggtgtgtctgctgaacgtattcgtcagctagaaaagaatgcgatgaaaaagctcaaagcc
gcagtcggtgagttttaa
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