KEGG   Vibrio chaetopteri: PG915_05040
Entry
PG915_05040       CDS       T10904                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
vck  Vibrio chaetopteri
Brite
KEGG Orthology (KO) [BR:vck00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vck03032]
    PG915_05040
   03036 Chromosome and associated proteins [BR:vck03036]
    PG915_05040
   03400 DNA repair and recombination proteins [BR:vck03400]
    PG915_05040
DNA replication proteins [BR:vck03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    PG915_05040
Chromosome and associated proteins [BR:vck03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    PG915_05040
DNA repair and recombination proteins [BR:vck03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      PG915_05040
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 Arteri_nsp7a HU-CCDC81_euk_1 ACP_syn_III_C DUF7342 HU-DNA_bdg
Other DBs
NCBI-ProteinID: XCD16903
UniProt: A0AAU8BKM2
LinkDB
Position
1:1099468..1099740
AA seq 90 aa
MNKTQLVEKIAENADLSKASAGRALDAFIEAVSTTLEEGDQVALVGFGTFSVRTRAARTG
RNPKTGEEIQISEAKVPAFKAGKALKDACN
NT seq 273 nt   +upstreamnt  +downstreamnt
gtgaacaaaacacaattagtggaaaaaatcgcagaaaacgcagatctatctaaagcttca
gctggtcgtgcactagacgctttcatcgaagcagttagcactactctagaagaaggtgat
caagtggctctagttggctttggtacattcagcgtacgtactcgtgctgctcgtactggt
cgtaacccaaaaactggcgaagagatccaaatctctgaagctaaagttcctgcattcaag
gcgggtaaagcgcttaaagacgcttgtaactaa

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