Vibrio chaetopteri: PG915_07610
Help
Entry
PG915_07610 CDS
T10904
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
vck Vibrio chaetopteri
Brite
KEGG Orthology (KO) [BR:
vck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vck03400
]
PG915_07610
DNA repair and recombination proteins [BR:
vck03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
PG915_07610
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
DUF7577
SLFN-g3_helicase
AAA_22
zf-tcix
Zn_ribbon_3
DZR
T1R_D3-like
AAA_30
AAA_16
Motif
Other DBs
NCBI-ProteinID:
XCD17380
UniProt:
A0AAU8BM62
LinkDB
All DBs
Position
1:complement(1679687..1681423)
Genome browser
AA seq
578 aa
AA seq
DB search
MYTLRPYQADSVKAVIHYFRKNDTPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKEL
VEQNHAKYEGYGLKGSIFSAGLGRKETSEQVVFASVQSVVRNLDAFANQFSLLVIDECHR
VPETKTSSYQKVISHLCDINPGIKILGLTATPYRLGVGWIYQYHTKGLVRSDEPRFFKDC
IFELPIQYLLDEGFLTPAKLIDAPVLSYDFSQLKPTSMGKYKESEMDLVIEQSKRATPQI
VEQIIRYSEDKQGVMIFAATVRHAQEILSLLPEQASQIVIGDTPTPERDDIITRFKQREI
KFLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSDGKTECLVLDYAGNTY
DLYQPEVGNPKPDSDSEIITIPCPACGFNNDFWGKLDANGFLIEHFGRKCQGYFTDEETG
EREHCDYRFRAKYCSECGADNDIAARICHECDATLVDPDKKLKEALNLKDALVFECVDMN
LQVHKDDKGKSSLRVNYIGDNDAQVSEFWSLSTKKQKQTFLSKFVRPHLADKHREFDATS
PTKVVNNQHRFRLPAFVIARKSGRFWKMRDKVFDDELN
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgtacacgcttcgaccttatcaagccgactccgttaaagccgttatccattatttccgc
aaaaatgacaccccagctgtcatcgtgctcccaacaggcgccggtaaaagcttggtcatt
gctgagctcgctcgccttgcacgcggtcgagtactcgtgctcgcccacgttaaagagtta
gtggagcaaaaccacgcaaaatatgaaggctacggcctgaaagggtcgatattctcagcg
ggtctcgggcgcaaagaaacctccgaacaagtcgtcttcgcttcagtacaatctgtggtg
agaaaccttgatgcattcgccaatcagttctcattgctggtcatcgatgaatgccaccgc
gtgccagagaccaaaacatcgagctaccaaaaagtcatcagtcatttatgcgatattaac
cctggcataaaaatacttggactgaccgcgaccccatatcgccttggtgtcggctggatt
taccaatatcacaccaaaggcttggtgcgtagcgatgagccgcgcttcttcaaagactgt
atttttgaacttccgattcagtaccttttggatgaaggattccttacccctgcaaaactc
attgatgctccagtactgagctacgacttctctcagttaaagcccaccagcatgggtaaa
tacaaggagtcggaaatggacttggtgattgagcagtccaagcgcgcgacgcctcagatt
gtggagcagatcatccgctacagtgaagataagcaaggcgtgatgatttttgccgcaacg
gtgcgtcacgcacaagagatcctttcgctgctgccagaacaagccagtcaaatcgtcata
ggcgatacaccaacgcccgagcgcgacgacatcataacccgcttcaaacagcgagaaatc
aaattcttggtcaacgtatccgtactaaccacaggctttgatgcgccgcatgtcgattta
attgcgatactgcgtccaactgaatccgtcagtctgtatcagcaaattgttggccgtggc
cttcgcctttctgatggaaaaacggaatgtttagtactcgattatgcaggaaacacatac
gatctctatcaacctgaagttggcaacccaaaacccgattcagactcggaaatcattacc
atcccctgccctgcctgcggctttaacaatgacttttggggtaaactcgatgccaacggt
tttttaattgagcactttggccgcaaatgccaaggctactttaccgatgaagagactggt
gagcgtgaacactgcgactatcgattcagagccaaatactgctctgaatgtggcgcagat
aacgacattgccgctcgaatttgtcacgagtgcgacgctaccttggtcgacccagataaa
aaactcaaagaggcgctcaaccttaaagacgcattagtcttcgagtgcgtcgacatgaac
ctgcaagttcataaggatgacaaaggcaaaagcagtctgcgtgttaattacattggcgac
aacgatgctcaggtgagtgagttctggtctttgagcaccaaaaagcaaaaacagaccttt
ttatctaaattcgtgcgcccgcatttggcggataagcatcgtgagtttgacgccacctcg
ccaactaaagtggtaaacaatcagcacaggtttagattgcccgcttttgtcattgctcgt
aaaagtggccgtttctggaaaatgcgcgataaagtattcgatgatgaattaaactga
DBGET
integrated database retrieval system