Vibrio chaetopteri: PG915_10860
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Entry
PG915_10860 CDS
T10904
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
vck Vibrio chaetopteri
Pathway
vck03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vck00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PG915_10860 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vck03400
]
PG915_10860 (ruvB)
Enzymes [BR:
vck01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PG915_10860 (ruvB)
DNA repair and recombination proteins [BR:
vck03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PG915_10860 (ruvB)
RecFOR pathway proteins
PG915_10860 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_14
AAA_22
AAA_3
nSTAND3
AAA_16
Rad17
NTPase_1
Bac_DnaA
AAA_18
NB-ARC
RNA_helicase
AAA_2
ABC_tran
TniB
Sigma54_activ_2
AAA_24
AAA_17
AAA_28
NPHP3_N
bpMoxR
AAA_PrkA
TsaE
ATP-synt_ab
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
XCD15092
UniProt:
A0AAU8BGC3
LinkDB
All DBs
Position
1:complement(2405045..2406052)
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AA seq
335 aa
AA seq
DB search
MIEADRLIAPENPVFRDEDVIDRAIRPKKLADYEGQDHVSDQMEIFIKAAQLRNEALDHL
LIFGPPGLGKTTLANIVANEMEVNIRTTSGPVLEKAGDLAALLTNLEENDVLFIDEIHRL
SPMVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIV
QRLEYYKIADLQNIVQRSARCLGLSMDPEGALEIARRARGTPRIANRLLRRVRDYAEVKG
NGHICADIADKALNMLDVDNQGFDYMDRKLLLSIMEKFSGSPVGLDNLAAAIGEEKDTIE
DVIEPYLIQQGYLQRTPRGRIASDRAYLHFGIDKV
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagccgatcgcttaatcgccccagaaaacccagttttccgtgatgaagacgtc
atcgatagagctattcgtcctaagaagttggctgactatgaaggtcaggatcacgttagt
gaccagatggaaattttcatcaaggccgcacagctacgtaacgaagcgctcgatcattta
ttgatattcggacctcctggtttgggtaagaccacgttggcgaatatcgttgccaacgag
atggaagtaaacatccgtaccacttctggcccagtgcttgaaaaagccggcgaccttgct
gcgctgttgaccaatcttgaagaaaacgatgtactgttcatcgatgagatccaccgttta
agcccaatggtggaagaggtgctgtatccggcgatggaagattaccagctggatatcatg
attggtgaagggcctgcggctcgctcaatcaagattgacttgccgccgtttacgctcatt
ggtgcaacgacgcgcgcgggctcattgacgtcaccgcttcgtgaccgatttggcatcgtt
cagcgtcttgagtactacaagattgccgaccttcaaaatatcgtgcagcgcagtgctcgt
tgcttgggcttgtcgatggatccagaaggggcgttagaaattgcccgtcgagctcgtggt
acacctcgtattgctaaccgactgctacgccgtgtgcgtgactatgcagaggtgaaaggt
aacgggcatatctgtgctgacattgcagacaaagctctgaacatgcttgatgtcgataac
caaggtttcgattacatggatagaaaactgctgctctccatcatggagaagttctctggt
agccctgtcgggttagataacctagcagcagcgataggtgaagagaaagacactatcgaa
gatgtcattgaaccttacttgattcagcaaggctatctgcaacgaaccccgcgtgggcgt
attgcctcagatagagcctacttacactttggaatcgataaagtttaa
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