Vibrio chaetopteri: PG915_11395
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Entry
PG915_11395 CDS
T10904
Symbol
rluC
Name
(GenBank) 23S rRNA pseudouridine(955/2504/2580) synthase RluC
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
vck Vibrio chaetopteri
Brite
KEGG Orthology (KO) [BR:
vck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vck03009
]
PG915_11395 (rluC)
Enzymes [BR:
vck01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
PG915_11395 (rluC)
Ribosome biogenesis [BR:
vck03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PG915_11395 (rluC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
RluD_N
DUF3603
TGS
Orexin
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
XCD15194
UniProt:
A0AAU8BHE6
LinkDB
All DBs
Position
1:complement(2529797..2530744)
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AA seq
315 aa
AA seq
DB search
MSEIRTKVQFVDIDDDMAGQRIDNFLRNQLKNIPKSVVYRIVRKGEVRVNKKRVKAEYKL
QAGDLVRIPPVTLEEKEQEAPLNTNLSRVAELESKIIYEDDHMLILNKPSGLAVHGGSGL
KFGAIEALRALRPQARFLELVHRIDRDTSGILLVAKKRSALRHLQAQFREKTVQKYYYAL
VMGKWKPSCKVVKAPLLKNEVNSIVRVNPNGKPSETRFKVLTSFEQATLIQASPITGRTH
QIRVHAQYTGHPIAWDDRYGDRRFDAYTAKAGLDRLFLHAANIIFTHPGKEERMEIDAEM
EPKLQKALDKLKTMS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaattagaacaaaagtccaattcgtcgacatcgatgacgatatggctggtcaa
cgcatcgataactttttgcgtaaccaacttaaaaacatcccaaaaagtgttgtgtatcga
atcgtgcgcaagggcgaagtgcgagtcaacaaaaagcgcgttaaggccgaatacaagctg
caagcgggtgacttggtgcgcattccgccggtaactctggaagaaaaagagcaagaagcg
ccgctcaataccaacctaagtcgtgtcgctgagctggaatcgaagatcatctatgaagat
gaccacatgctcatccttaataaaccttcgggtctggccgttcacggtggcagcggcctt
aagtttggtgctattgaagcgttacgcgctttgagaccacaagcgcgctttcttgagctt
gtgcaccgcatcgaccgtgatacgtccggtattttgttggtagcgaaaaagcgctcagcg
ctgcgccacttgcaagctcagttccgagagaaaaccgttcagaaatattattatgctttg
gtaatgggcaagtggaagccgagctgcaaggtcgtcaaagcaccacttcttaaaaacgaa
gtgaacagtattgtcagagtgaaccctaacggcaagccatcagaaacacgtttcaaagtg
ctgacgtcttttgagcaagcgacgttaattcaggcaagtccgattaccgggcgtactcac
cagatacgagtgcacgctcaatataccggtcaccctattgcgtgggacgaccgttacggt
gatcgccgatttgatgcttacacggccaaagcaggattggatcgtttattcctacatgct
gcaaacattattttcacccacccgggtaaagaagagcgaatggaaatcgacgccgaaatg
gagcctaagcttcaaaaagcattggacaagcttaagacgatgtcttga
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