Vibrio chaetopteri: PG915_11955
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Entry
PG915_11955 CDS
T10904
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
vck Vibrio chaetopteri
Pathway
vck02020
Two-component system
vck02040
Flagellar assembly
vck05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vck00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PG915_11955
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
PG915_11955
09142 Cell motility
02040 Flagellar assembly
PG915_11955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vck03021
]
PG915_11955
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
vck02035
]
PG915_11955
Transcription machinery [BR:
vck03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PG915_11955
Bacterial motility proteins [BR:
vck02035
]
Flagellar system
Flagellar assembly proteins
Stator
PG915_11955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_10
UPF0122
Rv2175c_wHTH
GerE
MarR_2
HTH_24
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
XCD15295
UniProt:
A0AAU8BHL2
LinkDB
All DBs
Position
1:complement(2655382..2656113)
Genome browser
AA seq
243 aa
AA seq
DB search
MNKALTYDQHANLSGQQAFLEKYSVLVKRIAHHLIGRLPPNVLVEDLIQAGMIGLIEAQK
NYDGSKGASFETYAGIRIRGAMLDDIRRGDWVPRSVHKHSRDISQAISVLEVELNRDPTD
TEVANHLGMSLEQYHKALSDINCSKLVGIEDLGISEDSVSVADEEVNSPFQGVADDAFRE
ALIESIKSLPEREALTLSLYYDEELNLKEIGEVLGVSESRVSQILSQSMQRLRTKLSAWT
DNN
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaagctttgacctatgaccagcatgccaatttgagtggtcagcaagctttcttg
gagaaatactcagtattggtgaaacgaatcgctcaccatttaattgggcgtttaccacct
aacgtgttggtagaagacttgattcaggccggaatgatcggcttgattgaagcacaaaaa
aattatgatggtagcaaaggtgcaagctttgagacctacgctggcattcgcattcgagga
gcgatgctagacgatattcgtcgaggtgactgggtgccgcgttcggtacacaagcacagt
cgtgatatttcgcaggcgatttcggtattggaggtggagcttaatcgtgacccgaccgat
acggaagtcgccaaccatttaggaatgagcctagaacaatatcacaaggcattgtcagat
attaactgctcaaaacttgttggtattgaagatcttggcatatccgaagactctgtatct
gttgcagatgaagaagttaactcgccttttcagggtgtcgcggatgatgcatttcgcgaa
gcgttaatagaatcaataaaatcgctcccagagcgtgaagcgttgacgttatccctgtat
tatgatgaagagttaaatttgaaggagataggtgaggtattgggcgtcagcgaatcgcgc
gttagccaaatactaagtcaatccatgcagcgtcttcgcaccaagctaagcgcttggacc
gataataattaa
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integrated database retrieval system
