Vibrio chaetopteri: PG915_15245
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Entry
PG915_15245 CDS
T10904
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
vck Vibrio chaetopteri
Pathway
vck03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vck00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PG915_15245 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vck03021
]
PG915_15245 (rpoA)
03400 DNA repair and recombination proteins [BR:
vck03400
]
PG915_15245 (rpoA)
Enzymes [BR:
vck01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PG915_15245 (rpoA)
Transcription machinery [BR:
vck03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PG915_15245 (rpoA)
DNA repair and recombination proteins [BR:
vck03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PG915_15245 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
XCD15895
UniProt:
A0AAU8BHJ1
LinkDB
All DBs
Position
1:complement(3345528..3346520)
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AA seq
330 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSTTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IEGVLHEYSTKEGVQEDILEILLNLKGLAVRVAEGKDEVFITLNKSGSGPVVAGDITHDG
DVEIANPEHVICHLTDDNAEISMRIKVERGRGYVPASARIHTEEDERPIGRLLVDATYSP
VDKIAYAVEAARVEQRTDLDKLVIDMETNGTLEPEEAIRRAATILAEQLDAFVDLRDVRV
PEEKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKS
LTEIKDVLASRGLSLGMRLENWPPASIAED
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtaacagaatttcttaagccacgtcttgttgacatcgaacaagttagc
acgacacacgcaaaagtaactcttgagccattagagcgtggctttggtcacactctaggt
aatgcgcttcgccgtattttgctttcgtcaatgccaggttgtgcagtgactgaagttgaa
atcgaaggcgttctgcacgagtacagcactaaagaaggtgtacaagaagatatccttgag
attcttcttaacctgaaaggtctagctgttcgcgttgctgagggcaaagacgaagtgttt
attacgcttaacaagtcaggctcaggccctgttgttgcaggtgacatcacccatgatggt
gatgtagagatcgctaacccagaacacgttatttgtcacctaacggatgacaatgctgag
atttctatgcgaatcaaagtagaacgtggtcgtggttatgttccagcttcagctcgtatc
catactgaagaagatgagcgtccaatcggtcgtttgctagttgacgcgacttacagccca
gtagacaaaattgcctacgctgtagaagcggcacgtgttgagcaacgtactgacctagac
aagctcgttatcgatatggaaacgaacggtactctagaacctgaggaagcaatccgtcgc
gcagctactatcctagctgagcaattggatgcattcgtagatcttcgtgatgtacgtgtt
cctgaggagaaggaagagaagccggagttcgatcctattctactgcgtcctgtagacgat
cttgaactaacagttcgctctgctaactgtctaaaagcagaagcgattcactacatcggt
gatcttgtacagcgtactgaggttgagctacttaaaacgccaaaccttggtaaaaaatct
cttactgagattaaagacgtacttgcatcacgtggtctgtctctgggtatgcgcctagaa
aactggccaccagcgtctatcgctgaagattaa
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