Vibrio chaetopteri: PG915_17475
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Entry
PG915_17475 CDS
T10904
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
vck Vibrio chaetopteri
Brite
KEGG Orthology (KO) [BR:
vck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vck03016
]
PG915_17475 (truD)
Enzymes [BR:
vck01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
PG915_17475 (truD)
Transfer RNA biogenesis [BR:
vck03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PG915_17475 (truD)
Prokaryotic type
PG915_17475 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
DUF4379
Motif
Other DBs
NCBI-ProteinID:
XCD18557
UniProt:
A0AAU8BRW5
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All DBs
Position
2:299048..300001
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AA seq
317 aa
AA seq
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MKYRIKQKNEDFRVCEVINLDIADSPTNYQLFCLVKSGISTFNAIDIISQEFNLEEGQIG
VAGLKDEEGITQQYLTIESHKVPSKFNDKDSNFWLELYQIGFSNNKITVGSNLGNAFNIV
LRGLDEEAQNALTSINETQLRVPNYYDSQRFGLPNQPALTHLIGQHYLEGNLDKCLEFAR
ESGVLANREVTLENLDFLIPMRERAFWLCSHGSHMWNKKLSELIQAEGSASASIRIADNS
YFAPNQDDFAAHKLPNKLAIDKWRAIDGEIKKLSATRDCFIYCHFKSEPLDSDSCELQFT
LPTGSYATMAIKGILGV
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaagtatagaataaaacaaaaaaatgaagactttagggtatgcgaagtcattaactta
gatattgccgatagccctactaactatcaacttttttgtttagtgaagagtggtatctca
acatttaacgctatagatattattagccaagaatttaacctagaggaaggtcaaattggc
gtagccggtttaaaagatgaagaagggatcacgcagcaatatctcacaattgaaagtcat
aaagtccctagtaaatttaatgataaagacagtaacttttggcttgagttatatcaaatc
ggtttctccaacaataaaatcactgttggttctaatcttggaaacgcatttaatatcgta
ttaagaggacttgacgaagaggctcaaaatgcccttacaagcattaatgaaactcagctt
agagtccccaattactatgacagccaacgtttcggcttacccaatcaacctgcgctgaca
catctgatcggacaacactaccttgaaggtaatctcgataagtgtcttgaattcgcacgg
gaatcgggtgtgctggcgaatagagaggtaacgctagagaacctagattttttaatacct
atgcgcgaaagggctttttggctttgttctcatggctcacacatgtggaacaagaagctc
agtgaactcatacaagcagaaggctccgctagcgcctctatccgtatcgcggacaacagc
tactttgctccaaaccaagatgactttgcagcgcataagcttccgaataaattagccata
gacaagtggcgagcaatcgacggcgaaataaagaaactgtctgcaaccagggactgcttt
atttattgtcattttaaatctgagccgctcgactcagatagctgtgagttgcagttcaca
ttgccgactggtagctacgcaacgatggcaataaaaggcatcttaggtgtttaa
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