Vibrio chaetopteri: PG915_18160
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Entry
PG915_18160 CDS
T10904
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
vck Vibrio chaetopteri
Pathway
vck03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vck00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PG915_18160 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vck03019
]
PG915_18160 (recQ)
03400 DNA repair and recombination proteins [BR:
vck03400
]
PG915_18160 (recQ)
Enzymes [BR:
vck01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PG915_18160 (recQ)
Messenger RNA biogenesis [BR:
vck03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PG915_18160 (recQ)
DNA repair and recombination proteins [BR:
vck03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PG915_18160 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
HTH_40
Helicase_C
ResIII
GerE
HHH
Motif
Other DBs
NCBI-ProteinID:
XCD18680
UniProt:
A0AAU8BPN9
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All DBs
Position
2:444194..446344
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AA seq
716 aa
AA seq
DB search
MMPNTPTATPFTPNELLKSLFGYDNFRHQQADIIDSLMSGNDVMTLMPTGGGKSICYQIP
AILRQGVGVVVSPLIALMQDQVDALHQVGVRAAYLNSTLSPYDQQVVEQQVLTGDIQILY
VAPERLLMEKTLRLLEQSSLSLFAIDEAHCVSQWGHDFRPEYQQLSVLKQRFPTVPRIAL
TATADLKTREEIIAQLALEQADVYVHSFDRPNITYYVSDLGNAKQELWRFIDTHHQDDAG
IVYCLSRKKVEETAQWLCDMGKTALPYHAGLSSEQRANHQRRFLSEDGIIVVATIAFGMG
IDKPDVRFVAHLSLPKSIEAYYQETGRAGRDGMPANAWMSFGMQDMVLQRQMVQNSEGAE
QYKRVSIQKLNRLLGYCDLATCRRQSLLAYFGETLSKPCGNCDNCLTPPETWDGLQATQK
ALSTVYRTGQRFGVSYLVNILLGKADSRITQNQHDTLSTFGIGNDLSAKEWQGVFRQLLA
MNLLEVHGEHGSLQLTELCRPYLKGEQPIELRKLRVSKKAAKSAKKKSSGTLSAADMPQF
EKLREVRAELAKQQSVPAYMICHDATLESLASVRPQTLDELSTIPGFGEVKIEKYGDAFI
AAIEPKSEAEKQLSDTELESLGLLNKGFTVEDIANERGLKATTIMSHLAQAIELNACELN
SVIALSDEEIQAITQQAIAFDSLTQQAIKPLFEHFEQQYDYGTLKCVLAKMASQGQ
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatgccgaacactccgaccgcgacccccttcacgcccaatgaactgctgaaatctctt
tttggttacgataattttcgtcatcaacaagcggacattatcgactcgttgatgtcggga
aatgatgtgatgacactaatgccaactggcggcggtaaatctatttgttatcaaataccg
gctattctgaggcagggcgttggcgttgtggtgtctccacttatcgcactgatgcaagat
caagtcgacgctctccaccaagttggcgttcgtgctgcttatctcaactcaacattgagc
ccgtacgatcagcaagtcgtagaacagcaagtactcaccggtgacatccagatcctgtat
gtcgcacctgagcgactgttaatggagaagacgcttcgtttgttggaacaatcaagcctg
tcactatttgctattgatgaagcgcactgtgtaagccagtggggtcatgactttcgccca
gagtatcaacagctcagcgtgctcaaacagcgttttcctaccgtgccaagaattgcgctc
accgcaaccgccgatctaaaaacacgcgaggagatcatcgcacagttagcgctcgagcaa
gccgatgtttatgttcacagctttgatcgccctaatatcacttactacgtctccgacctt
ggcaatgccaaacaagagttgtggcgctttatcgacacccatcatcaagatgatgccggt
attgtctattgcctatcgcgtaaaaaagtagaagagacggcgcagtggctgtgtgacatg
ggtaaaactgctttgccttaccatgcgggactatcgagtgagcaacgcgccaatcatcag
cgccgctttttgagcgaagacggcatcatcgtcgtcgccaccatcgcatttggaatgggg
attgataagcccgatgttcggtttgtagcgcacttaagcctgccaaaaagtattgaggcc
tattaccaggaaacaggccgtgctgggcgtgatggcatgcctgccaatgcttggatgagt
tttggcatgcaagacatggttctacaaaggcaaatggtgcaaaactccgaaggtgcggag
caatataagcgcgtatccattcaaaagctgaatcgactactcggctattgtgatttggcc
acttgccgccgccaatctctactcgcctactttggcgaaacgctatcaaagccttgcggt
aactgtgataactgcctaacaccacccgaaacctgggatggcttacaagcgacgcaaaag
gctctttccactgtatatcgaaccggccagcggtttggtgtgagctacttagtcaacatt
ctcttggggaaagcagacagtcgaattacccaaaaccaacacgataccctgtctacattt
ggtattggcaacgacctttccgctaaagagtggcaaggggtatttcgtcaactgctcgcc
atgaaccttctcgaggtgcacggtgaacacggcagtttacagcttaccgagttgtgccgt
ccttacctcaaaggcgagcagcccatcgaacttcgcaaactgcgagtctcgaaaaaagcg
gcgaaaagcgcgaagaagaaaagctctggcactttgtccgcagccgacatgccgcagttt
gaaaagcttcgcgaagttcgtgcagaacttgccaaacagcaatcggtaccggcttacatg
atttgtcatgatgcaacgttggaatctctcgccagcgtgcgcccgcaaaccctcgatgaa
ctttcgactatcccaggttttggtgaagttaaaatagagaaatacggcgatgcctttatc
gctgctattgagcctaaatccgaagccgaaaagcagctatcagataccgaacttgagtct
cttgggcttcttaacaaaggctttaccgttgaagacatagcgaatgaacgcgggctaaaa
gcaacgacgatcatgtctcatttagctcaagccatagagctgaacgcctgtgagttaaac
agcgtgatcgctttgagcgacgaagagatccaagcaattacacagcaagctatagcattt
gattcactaacacagcaggccatcaagccactattcgagcactttgaacagcaatacgac
tacggcacattgaaatgtgtactcgcgaaaatggcttcacaaggccaataa
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