Vibrio cholerae O1 LMA3984-4: VCLMA_A0042
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Entry
VCLMA_A0042 CDS
T01871
Symbol
rsmE
Name
(GenBank) Ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
vcl
Vibrio cholerae O1 LMA3984-4
Brite
KEGG Orthology (KO) [BR:
vcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcl03009
]
VCLMA_A0042 (rsmE)
Enzymes [BR:
vcl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
VCLMA_A0042 (rsmE)
Ribosome biogenesis [BR:
vcl03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
VCLMA_A0042 (rsmE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_25
Methyltransf_37
Methyltransf_31
FtsJ
MTS
Methyltransf_5
Methyltransf_11
Cons_hypoth95
Methyltransf_12
UPF0020
Methyltransf_4
TrkA_N
Methyltransf_36
TRM5-TYW2_MTfase
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
AEA77362
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Position
I:complement(41777..43057)
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AA seq
426 aa
AA seq
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MNVRAAAASALYQVVDLGHSLSNALPAAQQQIRPRDHALLQEICYGVLRQLPRLESISQA
LMEKPLKGKQRVFHFLILVGLYQLSFMRIPAHAAVGETVEGAQDLQGPRLRGLINAVLRN
YQRDQEGLDAQATSHDAGRYGHPGWLLKLLKESYPEQWQQIVEANNSKAPMWLRVNHQHH
TRAEYQALLEQAGIVTTPHAQAEDALCLETPCDVHQLPGFAEGWVSVQDAAAQLALTYLA
PQAGELILDCCAAPGGKTAHILERTPESQVVAIDCDETRLKRVRENLQRLQLTAQVICGD
ARYPQQWWQGEQFDRILLDAPCSATGVIRRHPDIKWLRRADDIAALAELQREILDAMWQQ
LKPGGSLVYATCSITPQENRLQVKAFLERTPDARLVGSDPAQPGRQILPGEEAMDGFYYA
VLSKQH
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttcgcgccgctgctgcgtcggctctttaccaagtggttgatttagggcactca
ctgtccaatgctttgcctgcggctcagcagcaaattcgcccacgtgatcacgccctgctg
caagagatctgctatggcgttttgcgccaattgccgcgtttggaatccatcagccaagct
ctgatggaaaaaccgttgaaaggcaaacaacgtgtgtttcacttccttatcttggtcggc
ctttatcaattaagcttcatgcgtatcccagcccatgcggcagtaggtgaaacggttgag
ggcgcacaagatctgcaaggccctcgtttgcgtggcttgatcaatgcggtgctgcgtaac
tatcagcgtgaccaagaaggcttagatgctcaagccaccagccatgatgcagggcgctac
ggccatccgggctggttattgaaattgctcaaagagagctacccagagcagtggcaacaa
attgttgaagccaacaacagcaaagcgccgatgtggctacgcgtcaatcatcagcaccat
actcgtgctgagtatcaagccctgctcgaacaagcgggcatcgtcactacgcctcatgcg
caagccgaagatgcgctgtgcttagaaacgccttgtgatgtacaccaactgccgggtttc
gctgaaggttgggtttcagtacaagatgccgctgcgcagttagcactgacttaccttgca
ccacaagcaggagagctgattttagattgctgcgctgcccccggtggcaaaactgcgcat
atcttggagcgcacaccagagagccaagtcgtcgcgattgattgtgatgaaactcgcctc
aaacgcgtgcgagaaaacctgcagcgtttacagctcactgcgcaagtgatttgtggcgat
gcgcgttacccgcaacagtggtggcaaggcgaacagtttgatcgcatcttgctggatgca
ccttgctcggcgaccggcgtgattcgccgccatcccgacatcaaatggctgcgccgcgca
gacgatatcgcggcattagccgagctacagcgcgaaattttggatgcgatgtggcaacaa
ctcaaacccggtggtagtttggtgtacgcaacgtgttcgatcacaccacaagaaaaccgc
ctacaggtcaaagcgttccttgaacgcacaccagatgcgcgcttagtgggttccgatccc
gcgcagcccggccgccaaatccttcccggagaggaagcgatggacggtttctattacgcc
gtattaagcaaacaacactga
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