Vibrio cholerae O1 LMA3984-4: VCLMA_A0057
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Entry
VCLMA_A0057 CDS
T01871
Symbol
thiC
Name
(GenBank) Thiamin biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
vcl
Vibrio cholerae O1 LMA3984-4
Pathway
vcl00730
Thiamine metabolism
vcl01100
Metabolic pathways
vcl01240
Biosynthesis of cofactors
Module
vcl_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
vcl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
VCLMA_A0057 (thiC)
Enzymes [BR:
vcl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
VCLMA_A0057 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AEA77377
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Position
I:59747..61687
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AA seq
646 aa
AA seq
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MSNRKQARLEAKRFIDTLSVEPYPNSQKSYLLGSRPDIRVPVREITLSDTLVGGSKDAPI
FEPNEPICVYDTSGVYTDPSHDIDLYKGLPKLREEWIEERRDTHILPSMSSHFARERLAD
ETLDELRYGHLPRIRRAIGKHRVTQLHYARQGIITPEMEFVAIRENSRRLAHQDPSLLQQ
HAGQNFGAHLPDLITPEFVRREIAEGRAIIPCNINHPESEPMIIGRNFLVKVNANIGNSS
VSSSIEEEVEKLVWATRWGADTVMDLSTGRNIHETREWILRNSPVPIGTVPMYQALEKVN
GVAENLTWEVMRDTLLEQAEQGVDYFTIHAGLLLRYVPMTAKRVTGIVSRGGSIIAKWCL
SHHQENFLYTHFREICEICAQYDVALSLGDGLRPGSIADANDEAQFAELRTLGELTKIAW
EYDVQVMIEGPGHVPMHLIKANMDEQLKHCHEAPFYTLGPLTTDIAPGYDHITSGIGAAM
IGWFGCAMLCYVTPKEHLGLPNKEDVKTGLITYKLAAHAADLAKGHPGAQIRDNALALSK
ARFEFRWEDQFNLALDPVTARAFHDETLPQESKVAHFCSMCGPKFCSMKISQEVRDYANN
QTLDTTVIDLVMPAESIQLAMQDKSREFLASGAELYHPLVKEPIEE
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccgtaaacaagcaagactggaagcgaagcgctttattgataccctttctgtt
gaaccctatccgaactctcaaaaatcttacctattaggctctcgccctgatattcgggta
cctgtcagagaaattactctcagcgatactttggtcggtggcagtaaagatgcacccatc
tttgagcccaatgagcctatctgtgtgtatgacacatctggtgtctatactgacccttca
catgatattgatctctacaaggggcttcctaagctcagagaggagtggattgaagagcgt
cgagatacacacattctgcctagtatgagctctcatttcgcccgtgaacgcttagcggat
gaaactctagatgaactgcgttatggccatttaccgcgaattcgccgagcgataggcaag
catcgagtcactcagttacattacgcacggcagggaatcattacgccggaaatggagttt
gtggcgatccgtgaaaactctcgtcgtcttgctcatcaagatccaagcctacttcagcag
catgctgggcagaattttggcgctcatttacccgatctgattactcctgagtttgtgcgt
cgtgagattgcggaagggcgcgccatcatcccatgcaatattaatcatcctgaatctgaa
cccatgattattggccgcaatttcttggttaaggtgaatgccaatatcggtaactcttct
gttagctcttctattgaagaagaagtcgagaagttagtttgggcaacccgctggggcgca
gatactgtgatggatctgtcgacagggcgaaatatccatgaaacccgtgagtggatatta
cgtaatagccccgtgccaattggtactgtacctatgtatcaggcgctggaaaaagtgaat
ggtgtagcagaaaacctcacatgggaagtgatgcgagataccttactagagcaagctgag
caaggtgtggactattttacaattcatgcgggcttgttattgcgttatgtgccgatgaca
gcgaagcgcgtaacgggcatcgtttctcgtggcggctcgattattgcgaaatggtgtctt
tctcaccatcaagagaatttcctttatacccattttcgcgaaatctgtgagatttgtgcg
caatatgatgtggctctgtccctaggggatggacttcgtcctggctcgattgctgatgct
aacgatgaagcacaatttgctgagttacgtacccttggtgagctaaccaaaatagcttgg
gaatatgatgttcaggtcatgattgaagggccggggcatgtacctatgcacttaattaaa
gccaatatggatgagcaacttaagcattgtcatgaggcgccattctacacccttggtcca
ttaacgaccgatattgctccgggttatgatcacattacctccggtatcggtgcggccatg
attggttggtttggctgcgccatgctttgctatgtcacacctaaagaacatttgggactg
ccaaacaaagaagatgtcaaaacaggattgattacttataagttagcagctcatgctgct
gatttggcgaaagggcatccgggagcacaaattcgtgataatgcattagcattatcaaaa
gcacgttttgagtttcgttgggaagaccagttcaatcttgcgcttgatcccgtcacagcg
cgcgctttccatgatgagacgctaccgcaggaatcaaaagtcgcgcacttttgctctatg
tgtggccccaaattctgctcgatgaagatctcgcaagaggtcagggattacgcaaataac
cagacattagacaccaccgtcattgacttggtgatgcctgcggaatctatacaactggcg
atgcaagataagtctcgtgagtttttagcctcaggtgctgaactctatcatcctttggtg
aaagagccgatcgaggagtaa
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