Vibrio cholerae O1 LMA3984-4: VCLMA_A0085
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Entry
VCLMA_A0085 CDS
T01871
Symbol
dinF
Name
(GenBank) DNA-damage-inducible protein F
KO
K26937
MATE family, multidrug efflux pump
Organism
vcl
Vibrio cholerae O1 LMA3984-4
Brite
KEGG Orthology (KO) [BR:
vcl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcl02000
]
VCLMA_A0085 (dinF)
Transporters [BR:
vcl02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
VCLMA_A0085 (dinF)
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Gene cluster
GFIT
Motif
Pfam:
MatE
Cad
Motif
Other DBs
NCBI-ProteinID:
AEA77404
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Position
I:complement(87445..88800)
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AA seq
451 aa
AA seq
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MSLILQTLKQPNVHRQVLAIALPMVLSNITVPLLGLVDAAVIGHLEHAWYLGGVALGSTM
ISVTFWLLGFLRMSTTGLTAQAHGAQNSQQLARVLLQGSVIALGLAALFLLFHRPIAELI
LHFSDASSEVKTYAETYFYLRAWSAPAALLNFVLLGWLLGTQNARAPMWMVIITNLTNIG
LDLLLVLGLGLKVEGAAIASVIADYTGLLFGLLCVVRYWRQYQLPAPFSFIPSLTKELSR
LVALNRDIFLRSLCLQAVFSFMTFQGAALGDDIVAANAVLMSFLMMISYGMDGFAYAMEA
MVGKAIGAKDDRQLRTAMISSTFWATMICLLLSLIFLGFGSDLIQMITNIPSVQATAEHY
LPWLVAMPLIAVWCFLLDGVFIGATKGTEMRNSMAISAVAFFAIYGFMTHYGNHALWLAM
LSFMALRGFTLGATFYTQWRAGTFLPARFSI
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
gtgtcactgattttgcaaacgttgaaacaaccgaacgtgcatcgccaagtgctggcgatc
gcgctgcctatggtgctgtctaacattaccgttccactgctcggcttggtcgatgctgcg
gtgatcggtcatctcgaacacgcttggtatttaggcggcgtggcactcggcagcactatg
attagcgtgacattctggctgctcggctttttacgtatgtcgaccacaggcttaaccgcc
caagcgcacggtgcgcaaaattcacagcagcttgctcgagttttactgcaaggcagcgtc
attgctctgggtttagccgcactgtttttactgtttcatcgccctatcgccgaactgatt
ttacacttcagcgatgccagcagcgaagtcaaaacctacgctgaaacgtatttctacctt
cgtgcttggagtgctccagccgcactccttaactttgtgctattgggctggttactcggt
acgcaaaatgcccgcgccccgatgtggatggtgatcatcaccaacctgaccaatattggg
ctcgatctactgttggtactcgggcttgggctgaaagtcgaaggagccgccattgcgtca
gttattgccgattataccggtctcttgtttggtctcctgtgtgtggtgcgttactggcgg
cagtatcagctcccagcccctttctctttcatcccctctctcaccaaagagctctcacga
ttggtcgcactcaatcgtgatatcttcctccgctcactctgtctgcaagctgtgtttagc
tttatgacctttcaaggcgcagcgttgggagatgacatcgtcgctgctaatgcggtgctg
atgagctttttgatgatgatttcctacggtatggatggatttgcctacgcgatggaagcc
atggtcggtaaagcaattggtgccaaggatgatcgtcaactgcgtactgccatgattagc
agtaccttttgggcgaccatgatctgtttgctgttaagcctgatcttcttaggttttgga
tcggatctgatccagatgatcactaacattccgagcgttcaagcaacggcggaacattat
ctgccttggctggtcgccatgccattaatcgccgtgtggtgttttctattggatggtgtg
tttatcggcgcgaccaaaggcacagagatgcgaaatagcatggctatttcggccgtcgcc
ttctttgccatttacgggttcatgacccactacggtaatcacgccctgtggctagccatg
ctcagctttatggcactgcgtggttttaccttaggggctaccttttatactcaatggcgc
gcggggacttttttaccagctcgcttttccatttaa
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