Vibrio cholerae O1 LMA3984-4: VCLMA_A0115
Help
Entry
VCLMA_A0115 CDS
T01871
Symbol
lysA
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
vcl
Vibrio cholerae O1 LMA3984-4
Pathway
vcl00300
Lysine biosynthesis
vcl00470
D-Amino acid metabolism
vcl01100
Metabolic pathways
vcl01110
Biosynthesis of secondary metabolites
vcl01120
Microbial metabolism in diverse environments
vcl01230
Biosynthesis of amino acids
Module
vcl_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vcl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VCLMA_A0115 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VCLMA_A0115 (lysA)
Enzymes [BR:
vcl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
VCLMA_A0115 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AEA77433
LinkDB
All DBs
Position
I:119054..120307
Genome browser
AA seq
417 aa
AA seq
DB search
MDYFNYQEDGQLWAEQVPLADLANQYGTPLYVYSRATLERHWHAFDKSVGDYPHLICYAV
KANSNLGVLNTLARLGSGFDIVSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKI
KCFNVESEPELLRLNKVAGELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAA
QVYRLAHSLPNLDVHGIDCHIGSQLTALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGG
LGVVYRDELPPQPSEYAKALLDRLERHRDLELIFEPGRAIAANAGVLVTKVEFLKHTEHK
NFAIIDAAMNDLIRPALYQAWQDIIPLRPRQGEAQTYDLVGPVCETSDFLGKDRDLVLQE
GDLLAVRSSGAYGFTMSSNYNTRPRVAEVMVDGNKTYLVRQREELSSLWALESVLPE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
ttggattacttcaattatcaggaagatggtcagttgtgggctgagcaagttccactcgcc
gatttggcaaaccagtacggtacaccgctttatgtatactcaagagcgacacttgagcgc
cattggcacgcgtttgataaatcagtcggtgattatcctcacctgatttgttatgcggtg
aaagccaactctaacttaggggtattgaatactttagctcgtttgggttccggttttgat
atcgtctccgttggcgaattagagcgtgtattggccgccggtggtgacccaagcaaggtg
gtattctctggtgtgggtaaaaccgaagctgagatgaagcgcgccctgcaattgaagatc
aaatgctttaacgtggaatcggagcctgagctgctgcgcctgaataaagtggctggcgag
cttggtgttaaagcgccgatttcactgcgcatcaatcctgatgtggatgccaaaactcac
ccttatatttcaacgggtctgcgtgataacaaatttggtatcacctttgaccgcgcagcg
caggtatatcgcttagcgcacagcttacccaacctcgatgtacatggtattgactgccat
atcggctcacagctcaccgctctcgcaccgtttattgatgcgactgaccgtttactggca
ctgattgattcgctgaaagcggaaggcattcatatccgccacttggatgtcggcggtggt
ttaggggtggtttatcgtgatgaactgcctccgcagccttcggaatacgccaaagcattg
ctggaccgcctagagcgccaccgcgatttagagctgatttttgaaccgggacgcgcgatt
gcggctaacgcgggagtattggtgactaaggtggagtttctcaaacacaccgagcacaaa
aacttcgcgatcattgatgcggcgatgaacgatttgatccgccctgcactataccaagcg
tggcaagacatcattccactgcgtccgcgccaaggtgaagcgcaaacctatgatttggtt
ggcccggtgtgtgaaaccagtgatttcctagggaaagatcgcgacttagtgttgcaagag
ggagatttactggcggtgcgctcttcaggtgcgtatgggttcaccatgtcgtcgaattac
aatacccgtccgcgagtggctgaagtcatggttgatggcaataaaacctatttggtgcgt
cagcgtgaagagcttagcagcttgtgggcgttagaatcggtattaccggagtaa
DBGET
integrated database retrieval system