Vibrio cholerae O1 LMA3984-4: VCLMA_A0126
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Entry
VCLMA_A0126 CDS
T01871
Name
(GenBank) Predicted signal transduction protein
KO
K07181
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vcl
Vibrio cholerae O1 LMA3984-4
Pathway
vcl05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VCLMA_A0126
Enzymes [BR:
vcl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
VCLMA_A0126
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Gene cluster
GFIT
Motif
Pfam:
EAL
HDOD
DUF4327
Motif
Other DBs
NCBI-ProteinID:
AEA77444
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Position
I:131210..132436
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AA seq
408 aa
AA seq
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MYTTYVARQPILNAKRHTLGYELLFRDGEKNAFPEYMDADRATYRLIVENFLSLGTNPRI
ARSRCFINFPHKSLIRRLPLTLPREQIVVEILETCQPTDDLFEAVQELSQRGYLLALDDF
VYSPAWERFLPYVQIVKIDIMAMGLDKACEFVRGRLAQGSRRRFLAERVETEDEFHQARH
AGFTFFQGYFFSKPEIIKQRYVSPEHVIAMQLFREVCQPEVDYVRVERLVAQDIALSYKL
LRFVNTMSDRISVSISSFRQALVYLGQDKLRIFVSLAVASYISSKKPKELYNLSLQRAQF
CQLMATHPHFKAHREQAFLIGMFSVLDALLDTSIEQLVEQLPLADDVKLALREREGPLGT
LLDLEECFEKADWQGVEQHCLELGFDLEDVRQELIEAQRWSQDINRLI
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgtacacaacttatgtagcacgccaaccgatattgaatgcaaagcgacacacgctaggt
tatgagctgctgtttcgagatggagaaaaaaacgcgtttcctgagtacatggatgccgat
cgtgcaacctatcgtctgatcgttgaaaattttttatcccttggtaccaacccgagaatt
gcccgctcgcgctgttttatcaactttccccataaaagcttaattcggcgtttgcctctg
actctgccgcgtgagcagatcgtggtagaaattttggaaacgtgccaaccgaccgatgat
ctttttgaggcggtacaagagcttagccagcgaggttatctgctcgcgttagatgatttt
gtgtattcacccgcttgggagcgctttttaccctacgtacagatagtcaaaatcgacatc
atggcaatggggctcgataaagcgtgtgaatttgtgcgtggtcgcctggcgcagggaagt
cgtcgccgctttttggcagaacgagtcgaaaccgaagatgagtttcatcaagcgcgtcat
gcgggttttaccttcttccaaggctattttttcagtaagccagaaatcattaaacagcgc
tacgtcagtccagagcatgtgattgccatgcagctgtttcgcgaagtctgtcagcctgaa
gtcgattatgtgcgagtagagcgcttggtcgcgcaggacattgcgctctcctacaagctg
ctgcgtttcgtaaacactatgtcggatcggatctcggtctccatctcctcatttcgccaa
gccttggtttatcttggacaggacaaactgcgcattttcgtctctttggcggtcgcgtct
tatatctcctccaaaaagcccaaggagctttacaacttgtcgctacaaagagcgcagttt
tgccagttgatggcgacgcatccacattttaaagcgcatcgtgaacaagcgtttctgatt
ggcatgttttctgtgctggatgccttgctcgatacctcaattgagcaattggtggagcaa
ctgccgctggccgatgatgtgaagttagcactgcgagagcgtgaagggccactgggtact
ttgctcgatcttgaggagtgttttgaaaaagccgattggcaaggtgtggagcagcactgc
ctagaactgggttttgatctggaagatgtccgtcaggaattgattgaagcccagcgttgg
agccaggacatcaatcgattaatttag
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