Vibrio cholerae O1 LMA3984-4: VCLMA_A0162
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Entry
VCLMA_A0162 CDS
T01871
Symbol
uvrD
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vcl
Vibrio cholerae O1 LMA3984-4
Pathway
vcl03420
Nucleotide excision repair
vcl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VCLMA_A0162 (uvrD)
03430 Mismatch repair
VCLMA_A0162 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcl03400
]
VCLMA_A0162 (uvrD)
Enzymes [BR:
vcl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VCLMA_A0162 (uvrD)
DNA repair and recombination proteins [BR:
vcl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VCLMA_A0162 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
VCLMA_A0162 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_12
AAA_11
Speriolin_C
Motif
Other DBs
NCBI-ProteinID:
AEA77479
LinkDB
All DBs
Position
I:177272..179443
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AA seq
723 aa
AA seq
DB search
MIDPSLLLDGLNDKQREAVAAPLENLLILAGAGSGKTRVLVHRIAWLMSVEEASPFSVMA
VTFTNKAAAEMRGRIEELMHGTASGMWCGTFHGICHRILRAHYLDAKLLEDFQIIDSDDQ
QRLLKRLIKAHNLDDKQWPARQVAWWINNQKDEGLRPAHINAFDPVTQTYLKLYTAYQEA
CDRAGLVDFAEILLRALELLRGNQHIREHYQARFKHILVDEFQDTNAIQYAWLRMMAGAQ
SNVMIVGDDDQSIYGWRGARVENIEKFTREFPSVNTIRLEQNYRSTKTILEASNTLIANN
SERMGKQLWTEGLVGEPISVYSAYNELDEARFVVSKIKGWQEQGGTLTDCAILYRNNAQS
RVLEEALLQASLAYRIYGGMRFFERQEIKDALSYLRLINNRNDDTAFERVINTPPRGLGD
KTLETIRFAARDRGCTLWDASVGLLNDQVLTGRAASALSRFVELINALEEEGIDMPLHVL
TDHAVKTSGLLEMYQQEKGEKSKARIENLEELVTATRQFEKPEEAQEMTMLTAFLTHAAL
EAGEGQADEHDDAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSAEEAGRLEEERRLCY
VGMTRAMQKLYITYAEMRRLYGQDKYHKPSRFIRELPEGCLDEVRMKAQVSRPTSTGRFS
QTVVKESFNETGFNLGSRVRHPKFGEGTIINFEGSGPQSRVQVAFNGEGIKWLVTAYARL
EKV
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatccctctctattgctcgacggtctcaacgataaacaacgcgaagcggtggca
gcgccactggaaaatctactgattttggccggtgcaggcagtggtaaaacccgtgtgctg
gtgcaccggattgcgtggctgatgtcggtggaagaagcctcaccgttttcggtgatggcg
gtgacctttaccaacaaagctgcagccgaaatgcgtggtcgaattgaagagctgatgcat
ggcaccgcctctggtatgtggtgtgggactttccacggtatttgccaccgcattctgcgc
gcccattatctcgacgctaagctgctggaagattttcagatcatcgacagtgacgatcag
cagcgtctgctcaaacgcctcatcaaagcgcacaatctggatgataaacagtggccggcg
cgccaagtcgcgtggtggatcaacaatcaaaaagatgaaggattgcgtccggcgcacatc
aacgcctttgatccggttactcaaacctatctcaagctgtacaccgcttaccaagaagcg
tgcgatcgcgcgggcttggtcgatttcgccgagattttgctgcgtgctttagagctactg
cgtggtaatcagcacattcgcgagcattatcaggcgcgctttaagcacattttggtcgac
gaattccaagacaccaacgcgattcagtacgcgtggctgcgtatgatggcgggtgctcag
tcgaatgtgatgattgtcggtgacgatgaccagtcgatttacggctggcgtggcgcgcga
gtggaaaacatcgaaaaatttacccgcgaattcccgagcgtgaataccattcgactggag
caaaactaccgctccaccaagaccattttggaagcctcaaacacactgatcgccaataac
agcgagcggatgggcaagcagttgtggactgagggcttggttggcgaacctatttcggtg
tattcagcgtataacgagctcgatgaagcgcgctttgtggtcagcaaaatcaaaggctgg
caggagcaaggcggcacactgaccgattgtgcgatcttgtatcgtaacaacgcccagtca
cgggtactggaagaggcgttattgcaagcgagtttggcctaccgcatttatggcgggatg
cgctttttcgagcgtcaagagatcaaagatgcgctgagttatctgcgtttgattaataac
cgcaatgatgacaccgcctttgagcgagtgattaatacgccgccgcgcggtttgggtgat
aaaaccttagagaccattcgctttgccgcgcgcgatcgtggctgcaccttgtgggatgcc
agtgtcggtctgctcaatgaccaagtcttaactgggcgtgcagctagcgcgctgagccgc
tttgttgaactgatcaatgctttggaagaggaaggcatcgacatgccgctgcatgtgctc
acggaccacgcggtaaaaacctctggtctgctggagatgtatcagcaggaaaaaggcgaa
aaatccaaagcgcgaattgaaaacttggaagagctggtcacggcgacgcgccagtttgaa
aagccagaagaagcgcaagagatgaccatgctgaccgcgtttttgacccatgcggcgctt
gaagcgggtgaaggccaagctgatgagcatgatgatgcggtacaactgatgaccttgcac
agtgccaaaggattagagttcccgctggtgtttatggtcggcgtggaagagggcatgttc
ccgagccaaatgtctgccgaagaagcggggcgcctcgaagaggagcgtcgcctgtgttat
gtcggtatgacccgcgcgatgcaaaaactctacatcacctacgcggaaatgcgccgcttg
tacgggcaagacaagtatcacaaaccctcacgctttattcgtgaactgccagaaggctgt
ttggatgaagtgcgcatgaaggcgcaagtcagccgcccaaccagcacagggcgctttagc
caaaccgtagtaaaagaaagctttaacgaaaccggttttaatttgggctcacgagtccgt
cacccgaaatttggtgaaggcaccatcattaactttgaaggcagtggcccgcaaagccga
gtgcaagtggcgtttaatggcgaaggcattaagtggttagtgacggcttacgcaagactc
gagaaggtgtag
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