Vibrio cholerae O1 LMA3984-4: VCLMA_A0427
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Entry
VCLMA_A0427 CDS
T01871
Name
(GenBank) Ribosomal RNA small subunit methyltransferase E
KO
K09761
16S rRNA (uracil1498-N3)-methyltransferase [EC:
2.1.1.193
]
Organism
vcl
Vibrio cholerae O1 LMA3984-4
Brite
KEGG Orthology (KO) [BR:
vcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcl03009
]
VCLMA_A0427
Enzymes [BR:
vcl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.193 16S rRNA (uracil1498-N3)-methyltransferase
VCLMA_A0427
Ribosome biogenesis [BR:
vcl03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
VCLMA_A0427
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltrans_RNA
PUA_4
CDC48_2
Motif
Other DBs
NCBI-ProteinID:
AEA77729
LinkDB
All DBs
Position
I:complement(479955..480686)
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AA seq
243 aa
AA seq
DB search
MRIPRIYHPEPIHQLGTVALSEDAAGHIGRVLRMQAGQEVLLFDGFGAEFPAVISEVGKK
QVLVNITERVENSIESPLDLHLGQVISRGDKMEFTIQKSVELGVTTITPLLSERCGVKLD
EKRFEKKIQQWQKIAISACEQCGRNTVPEIRPIMDLEAWCAEPTEALKLNLHPRAKYSIN
TLPTPVSKVRLLIGPEGGLSAEEIDMTRRYQFEETLLGPRVLRTETAALTAITALQVRFG
DLG
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatccctcgaatttatcatccagaaccgatccaccagcttggcaccgttgccctg
agtgaagatgccgctgggcacatcggtcgcgtattgcgtatgcaagctgggcaagaagtg
ctgctgttcgatggttttggggctgaattcccagccgtgatcagtgaagtcggcaaaaaa
caggtattggtcaatatcactgagcgcgtagaaaacagcattgaatcgccgctcgatctg
catcttggtcaggtgatttctcgcggcgataagatggaattcaccatccaaaaatcggtg
gaattgggcgtcactaccatcacccctctgctttctgagcgttgtggcgtgaagctggat
gaaaaacgcttcgagaagaagattcagcagtggcagaaaattgcgatcagcgcttgcgag
cagtgtggccgtaataccgtaccggaaatccgtccgattatggatctcgaagcttggtgc
gcagagcccaccgaggcactgaaactcaatttgcacccacgcgctaaatactcgatcaac
accttacctaccccagtgagcaaagttcgtttgctgattggtcctgaaggtggtctgtca
gcggaagaaattgatatgactcgccgttaccagtttgaagaaaccttgttaggcccacgc
gtactgcgcacagaaacggcggcgctcacggcgataactgcactacaagttcgtttcggc
gatcttggctaa
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