Vibrio cholerae O1 LMA3984-4: VCLMA_A0517
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Entry
VCLMA_A0517 CDS
T01871
Name
(GenBank) Poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
vcl
Vibrio cholerae O1 LMA3984-4
Pathway
vcl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vcl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VCLMA_A0517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcl03019
]
VCLMA_A0517
Enzymes [BR:
vcl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
VCLMA_A0517
Messenger RNA biogenesis [BR:
vcl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
VCLMA_A0517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
AEA77807
LinkDB
All DBs
Position
I:complement(575712..577085)
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AA seq
457 aa
AA seq
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MNNNDFEPSNTRTYPDLALTIIPRQEHPISRQQISENALKVLYRLHGAGFEAFLVGGGVR
DLLLGGKPKDFDVATNATPEQLRQLFRNCRLIGRRFRLAHIMFGRDIVEVATFRGHHQES
SQSQNIAAQSEAGMLLRDNVYGTIDEDAERRDFTINAMYYNIADYSIHDYAGGMEDLEDR
LVRLIGDPETRYREDPVRMLRAVRFAVKLDFDIEEDTAAPIEQLAPLLRDIPAARLYEES
LKMLQAGHGLETYHLMRQYNLFQQLFPTIAEHFTADHSSKTEQMLDLVLDATDIRVEEDL
RINPAFMFAAMLWYPMIDLADRLMESLNLNEFDAMTEASNRILDEVVKRIAIPRRHTTTI
RDIWQLQQRLPRRSGKRAFRLLELNKFRAGFDFLEMRGEIEGGETKQLAEWWATFQSAGR
NMRQAMVGDIGNATSSSKSGARRRKPSRNKSKSKSSE
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaataataacgattttgaaccgagcaacactcgcacatatccagacttagctttgacc
atcattccgcgtcaggaacaccctatctcgcgtcagcagatcagcgaaaatgcgctgaaa
gtgctctatcgtctgcatggtgcggggtttgaggcctttctggtcggcggcggtgtgcgt
gatttacttctgggtggcaagccgaaagactttgatgtggccaccaacgccacgccagag
cagttgcgccaactgtttcgcaactgccgtctgattggtcgccgtttccgtctcgcgcac
attatgtttggacgcgacatcgtcgaagtcgccactttccgtggccatcatcaagagtcg
agccagagccaaaatatcgctgcacaatccgaagcgggtatgctgctgcgtgataacgtg
tacggcacgattgatgaagatgccgagcgccgcgatttcaccatcaatgccatgtattac
aacattgccgactacagcatccacgactatgccggcggcatggaagatctggaagatcgt
ttggtgcgcctgattggcgatccggaaacgcgttatcgtgaagatccggtacgcatgctg
cgcgcggtgcgttttgcggtcaaactcgattttgatattgaagaagataccgcggcgccg
attgagcaacttgcgccattgctgcgtgacattcctgcggctcgtctctacgaagagtcg
ctcaaaatgctgcaagcaggtcatggtttagaaacctaccacttaatgcgtcaatacaat
ctgttccagcaacttttcccaactatcgccgagcattttaccgccgatcacagttcaaaa
accgagcagatgttggatttagtactggatgcgaccgacattcgggttgaagaagatctg
cgcatcaatccggcctttatgtttgccgccatgctgtggtatccgatgattgatctcgcg
gatcgcttaatggaatcgctcaacctaaatgaatttgatgcaatgaccgaagccagcaac
cgcatcttggatgaagtggtcaaacgcatcgcgatcccgcgtcgccataccaccaccatt
cgtgatatctggcagttgcagcagcgcttaccccgtcgcagtggtaaacgagccttccgt
ctacttgaactgaacaagttccgtgcaggctttgatttcctcgaaatgcgtggcgaaatt
gaaggcggtgaaaccaaacaactggcggaatggtgggccaccttccaaagcgcgggacgt
aatatgcgccaagccatggtgggtgatatcggtaatgcaacgagcagcagcaaatctggt
gctcgccgccgtaaaccatcccgcaacaaatccaagagtaaatccagcgaatga
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