Vibrio cholerae O1 LMA3984-4: VCLMA_A0566
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Entry
VCLMA_A0566 CDS
T01871
Name
(GenBank) tRNA pseudouridine synthase B tRNA Psi55
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vcl
Vibrio cholerae O1 LMA3984-4
Brite
KEGG Orthology (KO) [BR:
vcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcl03016
]
VCLMA_A0566
Enzymes [BR:
vcl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
VCLMA_A0566
Transfer RNA biogenesis [BR:
vcl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VCLMA_A0566
Prokaryotic type
VCLMA_A0566
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
AEA77853
LinkDB
All DBs
Position
I:643009..643944
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AA seq
311 aa
AA seq
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MARRRKGRVIHGVILLDKPTGISSNDALQKVKRLYGAEKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKRYRVIAKLGERTDTSDSDGQVVQTRPVHVDDTLLACIAKFRGETDQV
PSMFSALKYQGRPLYEYARQGIEVPREARKITVYEIELHRFEGDEVEMEVHCSKGTYIRT
IVDDLGEMLGCGAHVTMLRRVGVANYPYERMVTLEQLNALVEQAHRDEKAVADVLDPLLL
PMDTAVEALPEVNVIPELMTLIQHGQAVQVSGAPSDGMVRITGGEQKLFLGVGEIDDNGK
VAPKRLVVYGE
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgacgtaaaggtcgggttatccacggcgtgattctgttggataagccgaca
ggtatctcttccaacgacgctttgcaaaaggttaaacgcctctatggcgctgaaaaagcg
ggacatactggcgcgcttgatcctctggcgacgggcatgttgccaatctgcctcggtgaa
gccactaagttttcccaatttctgctcgattctgataaacgttatcgtgtgatcgccaaa
ttgggtgaacgtaccgacacctcagattctgatggtcaagtggtacaaacgcgtcctgtt
cacgtggacgatacgctgctggcctgtatcgccaagtttcgcggtgaaacggatcaagtt
ccatccatgttttcagcgttgaaataccaaggtcgtccactctacgaatacgcccgtcag
ggtatcgaagtgccgcgtgaagcgcgcaagatcactgtgtatgagattgagctgcatcgc
tttgaaggtgatgaagtggagatggaagtacactgctcgaaaggcacttatattcgtacc
atagtcgatgatttgggtgaaatgctgggctgtggagcacatgtgaccatgctgcgccgt
gtgggtgtcgctaactatccgtatgagcgaatggtgacgctagagcaactcaacgctttg
gttgaacaagcccatcgtgacgaaaaagcggtggcggacgttctcgatccgctattactg
ccgatggatactgccgtggaagctttacccgaagtcaacgtgatcccagaactgatgaca
cttattcagcatgggcaagcagtacaggtttcgggtgcaccatccgacggtatggtgcgc
attactggtggcgagcagaagctattccttggcgttggcgagattgacgataacggtaag
gtcgcgccgaaacgcttggtggtgtacggcgaataa
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