Vibrio cholerae O1 LMA3984-4: VCLMA_A0579
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Entry
VCLMA_A0579 CDS
T01871
Name
(GenBank) C-di-GMP phosphodiesterase A-like protein
Organism
vcl
Vibrio cholerae O1 LMA3984-4
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PDU_like
Motif
Other DBs
NCBI-ProteinID:
AEA77865
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Position
I:complement(656084..658141)
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AA seq
685 aa
AA seq
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MTKFRKIHSLAFKQAKSVFLVSVLLGLCFSFYHTLSDLHQEQSKVQEHYNFKLVQSYENA
SQAAYHLNNLLAEQVATTLMLDPGIFKVEIVDDFGDVMTRKEKAISEQSQLVSVLASYLT
PAVSVFSAELHQPNSNVVVGKLSFYIDGSSIAKVFIAKTTRVLLFDLLRNTLLTTILLLF
FYQKLSRPITMLITWVNSLNDTQRSPLPLRLTHDDELSELASTFQSMWKGKELAESKLNQ
LAYYDSLTGLANRSLLLQKLSDAIETAQNSHSTGVLFYLDLDRFKTINDSLGHTIGDQLI
KAVALRMEAWTKNDYLSARIGGDEFAVLIPYLSPVKAEEVAKQLLTLISNPYAVDDHQFY
CTVSIGISVFPSVGSSNIDVLRQADTALYRAKASGRNKFMFYEPEMQAQVESFLEIEKGL
HEALNQRQLELFYQPQVDEQHNIIGVEALIRWNHPKRGLLPPGVFMPIAEETGQILPIGN
WIIEQACYQYAQWKKQGILPPHFRRLAINISPLQFAQESFIEQVNHALRQAGITGEPIEL
EITESLLLENVESAIEKMAKLKESQISISIDDFGTGYSSLRYLKHLAVDVLKIDRSFVNQ
LHLDDNDQAIVDTILAIARKLNLEVIAEGVEDTSELAALKKLGCNQFQGYLFDKPLRAEE
IAQRFVSNSYRKIQTLPVATNSLQK
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatttcgcaagattcattctttggcctttaagcaagccaaaagcgtgttttta
gtctctgtactgttgggactctgttttagtttttaccacaccttatccgatctgcaccaa
gagcagagcaaggtgcaggagcactataactttaaattggtgcagagttatgaaaacgcc
agtcaggcggcttaccatcttaataatctactcgccgagcaagtcgccaccaccttgatg
ctcgaccctggcatcttcaaagtggagattgtggatgactttggcgatgtgatgacccgt
aaagaaaaagcaatcagtgaacagagtcaattagtcagtgtgctcgccagctatcttacc
cctgcggtttccgtgtttagtgctgagctgcatcaacctaactccaacgtggtggtcggc
aaactgagcttctacatcgatggctcatcaatagccaaggtgttcatcgccaaaaccact
cgcgtactgctcttcgacctattacgtaatacgctattgacgacaattttactgctgttt
ttctaccaaaagctctctcgcccaatcaccatgctgatcacttgggttaactcactcaat
gacacacagcgctcacctctgcctcttcgtcttactcatgacgatgaactcagtgagctc
gcgtcgacgtttcaatcgatgtggaaaggcaaagagctagcagaatcgaaactcaatcaa
ttggcttattatgacagcctcacaggcctcgccaatcgcagtttgttgctgcaaaaattg
agtgatgcgattgaaactgcgcaaaactcacacagtactggcgtactgttctatctcgac
ttggatcgctttaaaaccattaatgactcactcggtcataccatcggtgaccagttgatt
aaagccgtggcgctgcgcatggaggcatggactaaaaacgactacctgtcagcacgaatt
ggtggcgatgagttcgcagtgctgatcccttatctctcgccagtgaaagctgaggaagtg
gccaagcagctactcactctgatttccaacccttatgcggtggacgatcaccagttctac
tgtaccgtgagtatcgggatttcggttttcccttccgtaggaagcagtaatattgatgta
ttacgccaagcggataccgcactgtatcgcgccaaagccagtgggcgtaacaagttcatg
ttctatgagccggaaatgcaggcgcaggtggagtctttccttgaaattgaaaaaggcttg
catgaagcgctcaatcagcgccaactcgagcttttctaccaacctcaggtcgacgagcag
cacaacattattggtgtcgaagcgctgatccgctggaaccatcctaaacgagggctgttg
cctcccggtgtttttatgccgatcgcagaagaaacaggacaaattttaccgataggcaac
tggatcattgagcaagcgtgttatcaatatgcccagtggaaaaaacaaggcattttaccg
ccccattttcgccgtttggcgatcaatatcagcccactacagtttgcccaggagtctttt
attgagcaggtgaaccacgctttacgccaagctgggatcacgggggagccgatagaatta
gagataactgaaagcttactgctggaaaacgttgagagcgccatagaaaaaatggccaag
ttaaaagagagccaaatcagtatttcgattgatgactttggaacaggctactcttcgctg
cgttacctcaagcatcttgcggtcgatgtgctgaaaattgaccgctcgtttgtcaatcaa
ctgcacctagacgataacgatcaagcgatcgtcgacaccatcttagcgattgccagaaaa
ctgaatttagaagtgattgccgaaggggtggaagacacctctgagttggccgcactcaaa
aaactggggtgtaaccaattccaaggctacctgtttgataaaccgctgcgagccgaagag
attgcgcagcgttttgtcagcaacagttatcgcaaaattcaaaccttacccgttgcgaca
aacagtttacaaaaatag
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