Vibrio cholerae O1 LMA3984-4: VCLMA_A0803
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Entry
VCLMA_A0803 CDS
T01871
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vcl
Vibrio cholerae O1 LMA3984-4
Pathway
vcl00260
Glycine, serine and threonine metabolism
vcl00460
Cyanoamino acid metabolism
vcl00630
Glyoxylate and dicarboxylate metabolism
vcl00670
One carbon pool by folate
vcl00680
Methane metabolism
vcl01100
Metabolic pathways
vcl01110
Biosynthesis of secondary metabolites
vcl01120
Microbial metabolism in diverse environments
vcl01200
Carbon metabolism
vcl01230
Biosynthesis of amino acids
vcl01240
Biosynthesis of cofactors
vcl04981
Folate transport and metabolism
Module
vcl_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vcl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VCLMA_A0803
09102 Energy metabolism
00680 Methane metabolism
VCLMA_A0803
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VCLMA_A0803
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
VCLMA_A0803
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
VCLMA_A0803
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
VCLMA_A0803
Enzymes [BR:
vcl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
VCLMA_A0803
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AEA78075
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Position
I:909851..911101
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AA seq
416 aa
AA seq
DB search
MLKRDMNIADYDPELYAAIQEETLRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDKAEALAIDRACQLFGCEYANVQPHSGSQANSAVYMALLNPGDTVLGMS
LAHGGHLTHGSPVNFSGKHYNVIPYGIDEAGQINYDEMEALALEHKPKMIIGGFSAYSQI
VDWKRMREIADKVGAYLFVDMAHVAGLIAAGVYPSPVPFAHVVTTTTHKTLAGPRGGLIL
SNAGEEMYKKLNSAVFPGGQGGPLMHVIAAKAVAFKEAMEPEFKEYQARVVKNAKAMVAQ
FQERGYKIVSNSTENHLFLVDLIDKNITGKEADAALGAANITVNKNSVPNDPRSPFVTSG
IRVGTPAITRRGFTEQDAKDLANWMCDVLDNINDQGVIEATKQKVLAICQRLPVYA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagcgtgatatgaacatcgctgattacgatccggagctatacgctgccattcag
gaagagacgcttcgtcaagaagaacatattgaacttattgcttcagaaaactacaccagc
ccgcgtgtaatgcaagcacaaggttctcaactgaccaacaagtacgccgaaggttatcca
ggtaagcgttactatggtggttgtgagtacgtggacaaagcagaagctttagcgattgat
cgtgcttgccaactgtttggctgtgaatacgcgaacgttcagccgcactctggatctcaa
gcgaacagtgctgtgtacatggcgctgctcaacccaggtgacaccgtgctaggtatgagc
cttgctcacggtggtcatttgactcacggttcaccggttaacttctcgggtaagcactac
aatgtgatcccttacggtatcgatgaagcgggtcaaattaactacgatgaaatggaagcc
ttagcactggagcataagccaaagatgatcatcggtggcttctcggcttactcacaaatc
gtggattggaaacgcatgcgtgaaatcgccgataaagtgggtgcttacctgtttgttgac
atggcgcacgttgcgggtctgattgcggcgggggtttatccaagcccagtgccttttgca
cacgttgtcacgaccaccacgcataaaacactggcaggtccacgcggtggcttgatcttg
tcaaatgccggtgaggagatgtacaagaagctgaactctgcagtattccctggcggccaa
ggcggtcctttgatgcacgtgattgcggcaaaagcggtggcgttcaaagaagcgatggag
cctgagtttaaagagtatcaagcgcgtgtggtgaaaaatgccaaagccatggtggcgcag
ttccaagaacgtggttacaagatcgtctctaacagcacggaaaaccatttgttccttgtt
gatctgattgataaaaacatcacaggtaaagaagcagatgccgctctgggcgctgccaat
attacagttaacaagaactcggtaccaaatgacccacgcagcccgtttgtgacttcaggt
atccgtgtcggtacaccagcgatcactcgccgtggttttaccgagcaagacgcaaaagat
ctcgccaactggatgtgtgatgttctagacaacatcaatgatcaaggtgtgattgaagcg
acgaaacaaaaagtattggcgatctgtcaacgtctgcctgtttacgcttaa
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