Vibrio cholerae O1 LMA3984-4: VCLMA_A0910
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Entry
VCLMA_A0910 CDS
T01871
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
vcl
Vibrio cholerae O1 LMA3984-4
Pathway
vcl03030
DNA replication
vcl03430
Mismatch repair
vcl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VCLMA_A0910
03430 Mismatch repair
VCLMA_A0910
03440 Homologous recombination
VCLMA_A0910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcl03032
]
VCLMA_A0910
03400 DNA repair and recombination proteins [BR:
vcl03400
]
VCLMA_A0910
Enzymes [BR:
vcl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VCLMA_A0910
DNA replication proteins [BR:
vcl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VCLMA_A0910
DNA repair and recombination proteins [BR:
vcl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VCLMA_A0910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_4
AAA
AAA_22
RuvB_N
AAA_5
AAA_16
AAA_14
AAA_30
ResIII
AAA_2
AAA_18
AAA_assoc_2
AAA_19
PIF1
Mg_chelatase
SKI
TsaE
Motif
Other DBs
NCBI-ProteinID:
AEA78172
LinkDB
All DBs
Position
I:1024774..1026852
Genome browser
AA seq
692 aa
AA seq
DB search
MSYLALARKWRPTRFSEVVGQSHVLTALENALAQNRLHHAYLFSGTRGVGKTTIGRLFAK
GLNCETGITATPCGQCATCQEIDQGRFVDLLEIDAASRTKVEDTRELLDNVQYKPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKPISV
ENIQQQLDKVLHAEQISSDSKALNLLAHAADGSMRDALSLTDQAIALGNGVVKSDIVAHM
LGTLDTDHALHLLQAISLQTPQAVMDCIETLAHRGVEWDGLLQQLSTQLHRIAMYQALPA
TLDKSLPEASRIESLAKTLAPQDVQLYYQIALKGRQDLPLSPTARIGIEMLMLRMMAFRP
SHVSLASVIVPPNTAVTTPTIATPTSQMAASAPQPQPVAQSNVSQPASQAMPHPVAPPMM
AAQPVVESAVSVTQREASHSINAPEVSVVTNTDTQSQASMPALAGLRHQLRSKRQEVQNK
GADGKKSDATSATPASALERIAQRAQQVQVSPERNDEDELEPEEEIYQWRPMQPIEVAVK
SEVTPTQLKKALEHEKTPEMVAKLIEEAVAQDAWSALIQRLETAKMVEQLALNSAFVRQG
DQISLTLRPSHAHLHNEKAQQELEQALNHVLGEACSLNITVGQEGETPLELRERLYQQKL
TSALYSLQTDPNVQFIERRFNAQLNSDSVRPI
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcttgctttagcacgcaaatggcgtccgacacgatttagcgaagtggtcgga
caatcccatgttttaaccgctttagagaacgctttggcgcaaaaccgtttgcaccatgcg
tacttgtttagtggcactcgaggcgtgggtaagaccaccataggtcgtttgtttgcgaag
gggctcaactgcgagacgggcataacggctacgccttgcggccagtgtgcaacctgtcaa
gaaattgatcagggacgctttgtggatctgctcgagattgacgctgcatcacgcaccaaa
gtggaagatacgcgcgagctactcgacaacgtgcagtacaaacctgcgcgtggacgcttc
aaagtttacctgatcgatgaagttcatatgctctcgcgtcacagcttcaatgcgctactg
aaaacgcttgaagagccgcctgagtatgtgaagtttttgctggcaaccactgatccacaa
aagctgcctgtgaccatcttgtcgcgctgtttgcagttccatctcaaaccgatcagtgta
gaaaatatccagcagcagctcgataaagtgctgcacgccgaacagatctcgagcgacagc
aaagcactcaatctgctcgcccatgctgcggatggcagtatgcgcgatgctcttagcttg
accgatcaagcgattgcgttgggcaatggcgttgtgaaaagtgacatcgtcgcgcacatg
ctcggcacgctagatactgatcatgctctacatctcttgcaagccatcagcctgcaaacg
ccacaagcagtcatggattgcatcgaaacacttgcccaccgtggcgtagagtgggatgga
ttactgcaacagctttcgactcaactgcatcgaattgctatgtaccaagcgctgcctgcc
accttggataaatcgctgccagaggcatcgcggattgagtcgttggccaaaaccttagcg
ccgcaagatgtgcagctttactaccaaattgcgctcaaaggtcgacaagatttaccactg
tcacccacggctagaattggcattgaaatgttgatgctgcgtatgatggcgtttcgtcct
tctcacgtctccttggcgagtgtgattgtgccacccaatacggcagtgacaactccaaca
attgcgacaccgacttctcaaatggcggcttcagcaccgcaaccacaacccgttgctcag
tcaaacgtatcgcaacctgcctcgcaagcgatgcctcaccctgtcgcaccgccaatgatg
gcagcacaaccggtggtagaaagcgcggtgtcagtcactcagcgagaagcatcacactcg
ataaacgctccagaagtctctgttgtcaccaataccgacacgcagagtcaagccagcatg
ccagccctagcagggttgcgtcatcaactgcgctctaagcgacaagaagtacaaaacaaa
ggcgcggatggaaaaaagtctgacgcgacatctgctactccagcgtcggcgctagagcgt
attgcgcagagagcacaacaggtgcaggtgtcgccagaacgcaatgatgaagatgagttg
gagcccgaagaggaaatctatcaatggcgcccaatgcaacctatcgaagtggcggtaaaa
agtgaagtcacgccaacgcaactgaaaaaagcgttagagcatgaaaaaacgccggaaatg
gtagcgaagttgattgaagaagcggtcgcgcaagacgcgtggtcggcattgattcaacgg
ctagagactgccaaaatggttgagcaattggcgctgaattccgcttttgttcgtcaaggc
gatcagatttctctgacgctgcgtccaagtcatgcccatctgcacaacgaaaaagcgcag
caagagttagaacaggcattgaatcatgtgcttggtgaagcttgttcattgaacattacc
gtgggacaagagggagaaaccccccttgagctgcgtgaacggctctaccagcagaaactc
acttctgccctgtacagtttacaaactgatcccaacgtgcagtttattgagcgtcgattt
aatgcgcagctcaatagcgacagcgtacgacccatttaa
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