Vibrio cholerae O1 LMA3984-4: VCLMA_A0918
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Entry
VCLMA_A0918 CDS
T01871
Name
(GenBank) Putative HTH-type transcriptional regulator ybaO
KO
K05800
Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
Organism
vcl
Vibrio cholerae O1 LMA3984-4
Brite
KEGG Orthology (KO) [BR:
vcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcl03000
]
VCLMA_A0918
Transcription factors [BR:
vcl03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
VCLMA_A0918
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Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
NirdL-like_HTH
HTH_11
HTH_20
HTH_27
DDRGK
HTH_Crp_2
TPR_IF140-IFT172
HTH_DeoR
SidC_lipid-bd
Motif
Other DBs
NCBI-ProteinID:
AEA78180
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Position
I:1032102..1032560
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AA seq
152 aa
AA seq
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MLLDKVDRQILAILQQDCTVSLNELAEAVNLTTTPCWKRLKKMEEGGVIRERVALLDAQA
LDLSFTAFVMVTTNNHSHEWYCRFVTAVEEFPEVMEFYRMAGEYDYMMKVQVKDMPCFDR
FYKKLVNSIEGLNKVTSTFAMESLKYTTQLPL
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atgttgctcgacaaagttgatcggcaaatcttggccattttgcaacaagactgcaccgtg
tcactcaatgaattagccgaagcggtcaatttaaccactacgccttgctggaagcgtttg
aaaaaaatggaagaaggtggtgtgattcgcgagcgagtcgcactgcttgatgcgcaagcc
cttgacctctctttcacggcctttgtcatggtgacgaccaataaccactcccatgaatgg
tactgccgctttgtgactgccgtggaagagtttcccgaagtgatggagttttatcgcatg
gcgggagaatacgattacatgatgaaagtgcaggtcaaagatatgccgtgttttgaccga
ttctataaaaaactggtcaatagtatcgaagggttgaacaaagtgacctccacctttgcg
atggagtcacttaaatacacgactcagttgccgctctaa
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