Vibrio cholerae O1 LMA3984-4: VCLMA_A1725
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Entry
VCLMA_A1725 CDS
T01871
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
vcl
Vibrio cholerae O1 LMA3984-4
Pathway
vcl00061
Fatty acid biosynthesis
vcl00071
Fatty acid degradation
vcl01100
Metabolic pathways
vcl01212
Fatty acid metabolism
vcl02024
Quorum sensing
vcl04146
Peroxisome
Module
vcl_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
vcl00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
VCLMA_A1725
00071 Fatty acid degradation
VCLMA_A1725
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
VCLMA_A1725
09145 Cellular community - prokaryotes
02024 Quorum sensing
VCLMA_A1725
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vcl01004
]
VCLMA_A1725
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vcl04147
]
VCLMA_A1725
Enzymes [BR:
vcl01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
VCLMA_A1725
Lipid biosynthesis proteins [BR:
vcl01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
VCLMA_A1725
Exosome [BR:
vcl04147
]
Exosomal proteins
Exosomal proteins of breast milk
VCLMA_A1725
Exosomal proteins of breast cancer cells
VCLMA_A1725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Pept_S41_N
DUF4235
Motif
Other DBs
NCBI-ProteinID:
AEA78928
LinkDB
All DBs
Position
I:complement(1972489..1974189)
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AA seq
566 aa
AA seq
DB search
MDKPWLSRYPKDVPETINPDQYPSLVEMFEQSVHKYADQPAFMNMGAVMTFRKLEERSRA
FAAYLQNDLKLKKGDRVALMMPNLLQYPVALFGVLRAGMIAVNVNPLYTPRELEHQLNDA
DARAIVIVSNFANTLEQIVANTQVKHVVLTSLGQMLPRAKGTIVDFVVKYVKGMVPKYDL
PGAISMRKALHKGRRLQYVKPFMSGEDIAFLQYTGGTTGVAKGAILTHRNMVANVLQAKG
AYGPVLQEGRELVVTALPLYHVFALTVNCLLFIEMGGRNLLITNPRDIPGFVKELQKYPF
TAITGVNTLFNALVNNEDFHELDFKNMKLAVGGGMAVQRAVAERWKKTTGVHLLEGYGLT
ECSPLVTGNPYDLTDYTGAIGLPVPSTEVRIVDDAGNVVPNDQVGELQVRGPQVMQGYWQ
RPEATKEVLNAEGWLSTGDIVKFDDQGLIHIVDRKKDMILVSGFNVYPNEIEDVVALHGK
VLEVAAIGQANDVSGELVKIYVVKRDPSLTKDEVIAHCRKHLTGYKVPKLVEFRDDLPKT
NVGKILRRVLREENDAQLAAKAKQSA
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
gtggataaaccttggctttcacgttatccgaaagacgtaccggaaaccattaatcctgac
cagtacccatcactggtcgaaatgtttgaacaatcggtacataagtacgcggatcagcca
gccttcatgaacatgggcgcggtgatgacattccgtaagctggaagagcgcagccgcgcc
tttgcggcttatttacaaaacgatctcaagctgaaaaaaggtgaccgtgtcgctctgatg
atgccgaacttgctgcaataccctgtggcgctgtttggtgttctgcgtgctggcatgatc
gcagtgaacgtcaacccactttacactccgcgagagctggagcatcaactgaatgatgcg
gatgcgcgcgcgattgtgatcgtctcaaactttgctaacaccttagagcagatcgttgcc
aatacacaggtcaagcatgtggtgctgaccagtcttggacagatgctgccacgcgccaaa
ggcacaattgtcgatttcgtggtgaaatacgtcaaaggcatggtacctaagtacgatctg
ccgggcgcgatttcgatgcgtaaagcgctgcacaaaggccgccgtctgcaatatgtgaag
ccgtttatgtccggtgaagacattgccttcttgcaatacactggcggtacaacgggtgta
gcgaaaggcgccattctgacgcaccgcaacatggtcgcaaacgtgctgcaagccaaaggc
gcttacggccctgtgctgcaagaggggcgcgagttggtggtcaccgcactgccgctgtac
cacgtgtttgccttaaccgtaaactgcttgctgtttattgaaatgggtggccgcaactta
ttgatcactaacccgcgtgatataccgggctttgtgaaagagctgcaaaagtacccattt
acagccattaccggtgtaaacaccctgtttaatgcgctggtgaataacgaagatttccac
gagctcgacttcaaaaatatgaagctagcagttggtggtggtatggcggtacaacgcgct
gttgccgagcgttggaaaaagactaccggtgtccatttgctagaaggctatggtctgacc
gagtgttcaccactggttaccggtaacccttacgatttgaccgattacaccggagccatt
ggtttaccagtaccgtcaaccgaagtgcggattgtggatgatgcgggtaatgtggtgcct
aacgatcaagttggtgagctgcaagtgcgtggtccacaagtcatgcaaggttactggcag
cgtcctgaagcgaccaaagaagtgctcaatgctgagggatggctttcaactggcgatatt
gtgaaattcgatgatcaaggtttgatccacattgttgatcgtaagaaagacatgattctg
gtttcaggctttaacgtttatccgaatgaaatcgaagatgtggtggcgctgcacggcaaa
gtgctagaagtcgcagcgattggtcaggctaacgatgtttctggcgaattggtgaagatt
tatgtggtgaagcgcgacccaagcctgaccaaagacgaagtgattgctcactgccgtaag
catctgactggctacaaagtaccaaaactggttgaatttcgtgacgacctgccaaaaacc
aacgtgggcaaaatcctgcgtcgtgtgctgcgtgaagaaaatgacgcacagttggcagca
aaggcgaagcaaagcgcataa
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