Vibrio cholerae O1 LMA3984-4: VCLMA_A2052
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Entry
VCLMA_A2052 CDS
T01871
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
vcl
Vibrio cholerae O1 LMA3984-4
Pathway
vcl00061
Fatty acid biosynthesis
vcl00071
Fatty acid degradation
vcl01100
Metabolic pathways
vcl01212
Fatty acid metabolism
vcl02024
Quorum sensing
vcl04146
Peroxisome
Module
vcl_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
vcl00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
VCLMA_A2052
00071 Fatty acid degradation
VCLMA_A2052
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
VCLMA_A2052
09145 Cellular community - prokaryotes
02024 Quorum sensing
VCLMA_A2052
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vcl01004
]
VCLMA_A2052
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vcl04147
]
VCLMA_A2052
Enzymes [BR:
vcl01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
VCLMA_A2052
Lipid biosynthesis proteins [BR:
vcl01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
VCLMA_A2052
Exosome [BR:
vcl04147
]
Exosomal proteins
Exosomal proteins of breast milk
VCLMA_A2052
Exosomal proteins of breast cancer cells
VCLMA_A2052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AEA79250
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All DBs
Position
I:2328873..2330558
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AA seq
561 aa
AA seq
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MIQPNQFNHPPCALPPPNEMLLRWAKERPNEVYLKQIINRQFVEFTYAEVADKALRLVSA
LRALGAEPGDKVALISKNCAEWFICDLAMMLGDYISVPIFPTAGSETIDYCLEHSESKIL
IVGKLDDSKATAHVLAERPNLISISLPYPSAAKCQYEFQTLIKQHQPSEERPTHFDEKLM
SIVYTSGTSGQPKGAMLTYGAFTWSAQQLINHIGIEENDRLFSYLPLAHITERVYIFGSS
IIGGVLTAFPESLDTFIEDVKMHRPTLFISVPRLWTLFQQRIQDKLPQKKLNILLKIPFV
NSLIKRKLADGLGLDQARVLGCGSAPVSPALLEWYRSVGLNITEAWGMTESFAYSTLNYP
FRADKIGTVGNAGPGIELKIAEDEEILVRSKGLFAGYYKNDTATAESFNDDGWLHTGDIG
SLDSEGYLTIQGRKKDTFKTAKGKFVAPVPIEKKLFEYSRVEMMCLIGSGLPAPILLAVP
HNFPHFDRSRYERTTQKVIARINSELESHEQIKGVLMIKDPWSIDNGILTPTLKIKRHVL
EKKYHDVGQNWPKGQLVVWEE
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgatccagcctaatcagttcaatcaccctccttgtgctctcccaccacccaatgagatg
ttgctgcgttgggctaaagagcgtccgaatgaggtgtacctaaaacagattattaaccgc
caatttgttgagtttacttacgccgaagtcgcggataaggctctacgcctcgtttccgct
ttacgagccttaggggctgagccgggcgataaagtcgcattaatttcaaaaaactgtgcg
gaatggtttatttgcgatttagccatgatgctcggggattacatcagtgtacctatcttc
ccgactgcaggcagtgagactatcgattactgccttgagcacagtgaaagtaaaatcctg
atcgtcggcaagctggatgatagtaaagccactgcgcatgtgttagcagagcgtcctaat
cttatcagtatctcgcttccttatccttcggcagccaaatgccaatatgagtttcaaacg
ctgatcaaacagcatcaacccagtgaagagcgccccacccactttgatgaaaaactgatg
tccatcgtttatacctcaggtacatcaggacaaccgaaaggtgccatgctcacttatggc
gcatttacttggtccgcccaacaactgatcaaccacataggcatcgaagaaaacgatcga
cttttctcatatctgccactcgctcatatcactgagcgagtttatatttttggctcatcg
atcatcggtggcgtactgaccgcatttccggaatctctcgatacctttatcgaagatgtc
aaaatgcaccgtccaaccctgttcatttctgtacctcgtttatggacactgttccaacaa
cgcatccaagataaactgccgcagaaaaagctgaatattctgctcaaaatccccttcgtc
aactcactcatcaaacgtaagttggccgatggtttagggctagatcaagctcgcgtgctc
ggttgtggctccgcaccagtctccccagcattactcgaatggtatcgcagtgtcggacta
aacattaccgaagcgtggggcatgacggaatcctttgcatacagcactctcaactatcca
ttccgtgctgacaaaatcggtactgtgggtaatgcaggaccgggcattgaactgaaaatc
gcggaggatgaagaaatcttagtccgcagcaaaggcttgtttgctggctactataaaaat
gacaccgcgacagccgaaagctttaacgatgacggttggctacatactggcgatatcggg
tcattggacagtgaaggctatttaaccattcaaggtcgtaaaaaagacacctttaaaacc
gctaaaggcaagttcgtcgcccccgttcctatcgagaaaaagctgtttgaatacagccga
gttgagatgatgtgcttgatcggctctggtctcccagcccccattttgttagccgttccg
cataatttccctcactttgatcgttcgcgttatgaacgcaccacccaaaaagtgatagca
cgcatcaatagtgaattggaatctcacgaacaaattaaaggggtgttaatgattaaagat
ccttggagcattgataacggcatcttaacgccaacgctcaagatcaaacgtcatgttcta
gagaagaaatatcacgatgtcggccaaaactggcctaaaggtcagctcgtcgtttgggaa
gagtaa
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