Vibrio cholerae O1 LMA3984-4: VCLMA_A2070
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Entry
VCLMA_A2070 CDS
T01871
Name
(GenBank) Uracil-DNA glycosylase, family 1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
vcl
Vibrio cholerae O1 LMA3984-4
Pathway
vcl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VCLMA_A2070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcl03400
]
VCLMA_A2070
Enzymes [BR:
vcl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
VCLMA_A2070
DNA repair and recombination proteins [BR:
vcl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VCLMA_A2070
Prokaryotic type
VCLMA_A2070
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AEA79268
LinkDB
All DBs
Position
I:complement(2350164..2350844)
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AA seq
226 aa
AA seq
DB search
MSESLTWHDVIGNEKQQAYFQQTLQFVESQRQAGKVIYPPAKDVFNAFRFTEFGDVKVVI
LGQDPYHGPNQAHGLCFSVLPGVKTPPSLVNIYKELAQDIPGFQIPPHGYLQSWAQQGVL
LLNTVLTVEQGMAHSHANTGWETFTDRVIDALNQHRNGLIFLLWGSHAQKKGQMIDRQRH
HVLMAPHPSPLSAHRGFLGCQHFSKTNQLLQAQGIAPINWQPELES
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatcactgacgtggcatgatgtcattggtaatgaaaagcagcaggcttacttt
caacaaactctgcaatttgtcgaaagccagcgtcaagccggaaaagttatctatcctccc
gctaaagatgtgtttaacgcctttcgctttaccgagtttggtgacgtgaaagtggtgatc
ttggggcaagatccttatcacggcccgaatcaggcgcatggtttgtgtttctctgtgcta
ccgggtgtcaaaacaccaccctcgttagtcaatatttataaagagttagcgcaagatatc
cctggatttcaaatcccacctcatggctacctacaaagttgggcacagcagggcgttttg
ctactcaacaccgtattgactgttgaacaaggtatggcccattctcatgcgaataccggc
tgggaaaccttcacggatcgtgtaattgacgccttgaatcaacaccgaaatgggttgatc
ttcctattgtggggatcgcacgcgcagaaaaagggccagatgatcgatcgccagcgccat
catgtcttgatggctccgcacccttcaccgctttcggcgcacaggggctttttaggatgt
cagcatttctctaaaaccaatcaattgctgcaagcgcaaggtatcgctcccattaactgg
cagcctgagctcgaatcttaa
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