Vibrio cholerae O1 LMA3984-4: VCLMA_A2071
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Entry
VCLMA_A2071 CDS
T01871
Name
(GenBank) Endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
vcl
Vibrio cholerae O1 LMA3984-4
Pathway
vcl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VCLMA_A2071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcl03400
]
VCLMA_A2071
Enzymes [BR:
vcl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
VCLMA_A2071
DNA repair and recombination proteins [BR:
vcl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
VCLMA_A2071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AEA79269
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All DBs
Position
I:complement(2351213..2352073)
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AA seq
286 aa
AA seq
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MYEKLIGAHVSASGGVELAPVRAHEIGANAFALFTKNQRQWAAKPLEASSIRAFKANCKK
WGFGSEAILPHDSYLINLGAPEPEKLDKSRAAFVDEMLRCDQLGLTLLNFHPGSHLQQVS
EEACLATIAESINLAHRQVPNVIAVIENTAGQGSNLGWRFEHLAAIIDQVEDKDRVGVCL
DTCHTFAAGYDLRTKAACDETFAEFERVVGMHYLRAMHINDSKGKLASRVDRHHSLGMGE
IGWECFEYIAQDARFNGIPLILETIDPDIWATEIATLRKFSTQKEN
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgtatgagaagttaatcggggcacatgtatcggcctctggtggtgtcgagctagcgcca
gttcgagctcatgaaatcggagcgaatgcttttgctctcttcaccaaaaaccagcgccaa
tgggcagctaagccactggaagcgagcagcattcgtgctttcaaagctaattgtaaaaaa
tggggatttggcagtgaggcgattttgccgcacgactcttatctgattaatttaggggct
ccggagcccgagaagctcgacaaatcacgagccgcttttgtcgatgaaatgctgcgttgt
gatcagttagggttaactttgcttaactttcatcccggtagtcatttacagcaggtctct
gaagaggcgtgtttagcgacaattgctgagtcaattaatcttgcgcatcgtcaagtaccg
aatgtgattgcggtgattgaaaataccgcagggcaggggagtaacttaggttggcgtttt
gagcatctggcggcaatcattgaccaagttgaggataaagatcgggttggcgtatgccta
gatacttgccacacctttgccgcagggtatgatttgcgtacgaaagccgcgtgtgatgag
acattcgctgagtttgagcgagtggtcggtatgcactatttgcgcgcaatgcacatcaat
gattcaaaaggtaagctggctagccgcgttgaccgccatcattccttaggtatgggagag
attggctgggagtgttttgaatatatcgcgcaagatgctcgatttaacggtatccctctg
attttagaaacgattgatcctgatatttgggcgactgagatcgcaacgctacgcaaattt
tcgacgcaaaaagagaattaa
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