Vibrio cholerae O1 LMA3984-4: VCLMA_A2116
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Entry
VCLMA_A2116 CDS
T01871
Name
(GenBank) pyruvate dehydrogenase, E3 component, lipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
vcl
Vibrio cholerae O1 LMA3984-4
Pathway
vcl00010
Glycolysis / Gluconeogenesis
vcl00020
Citrate cycle (TCA cycle)
vcl00260
Glycine, serine and threonine metabolism
vcl00280
Valine, leucine and isoleucine degradation
vcl00310
Lysine degradation
vcl00380
Tryptophan metabolism
vcl00620
Pyruvate metabolism
vcl00630
Glyoxylate and dicarboxylate metabolism
vcl00640
Propanoate metabolism
vcl00670
One carbon pool by folate
vcl00785
Lipoic acid metabolism
vcl01100
Metabolic pathways
vcl01110
Biosynthesis of secondary metabolites
vcl01120
Microbial metabolism in diverse environments
vcl01200
Carbon metabolism
vcl01210
2-Oxocarboxylic acid metabolism
vcl01240
Biosynthesis of cofactors
Module
vcl_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vcl_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vcl_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
vcl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
VCLMA_A2116
00020 Citrate cycle (TCA cycle)
VCLMA_A2116
00620 Pyruvate metabolism
VCLMA_A2116
00630 Glyoxylate and dicarboxylate metabolism
VCLMA_A2116
00640 Propanoate metabolism
VCLMA_A2116
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VCLMA_A2116
00280 Valine, leucine and isoleucine degradation
VCLMA_A2116
00310 Lysine degradation
VCLMA_A2116
00380 Tryptophan metabolism
VCLMA_A2116
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
VCLMA_A2116
00670 One carbon pool by folate
VCLMA_A2116
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vcl04147
]
VCLMA_A2116
Enzymes [BR:
vcl01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
VCLMA_A2116
Exosome [BR:
vcl04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
VCLMA_A2116
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
GIDA
AlaDh_PNT_C
NAD_binding_8
FAD_binding_2
Thi4
HI0933_like
FAD_binding_3
DAO
Motif
Other DBs
NCBI-ProteinID:
AEA79313
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All DBs
Position
I:complement(2412479..2413906)
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AA seq
475 aa
AA seq
DB search
MSKEIKAQVVVLGAGPAGYSAAFRCADLGLDTVIIERYNTLGGVCLNVGCIPSKALLHVA
KVIEEAKALTEHGIVFGEPKTDIDKVRLWKEKVINQLTGGLAGMAKMRKVNVVNGYGKFT
GPNTIEVEGEEGKTVVTFDNAIVAAGSRPIKLPFIPHEDPRIWDSTDALELKEVPGKLLI
MGGGIIGLEMATVYHSLGSKIDVVEMFDQLIPAADKDMVKVYTKRIKDKFNLMLETKVTA
VEAKEDGIYVSMEGKSAPAQAERYDAVLVAIGRVPNGKLLDAEKAGLEVDERGFIRVDKQ
MRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVISGKKHYFDPKVIPSIAYTEPEVAWV
GKTEKEAKAEGINYEVATFPWAASGRAIASDCADGMTKLIFDKETHRVIGGAIVGTNGGE
LLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEVFEGTITDLPNAKAKKKK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaaattaaagcccaagtcgtggtgcttggtgccggtcctgctggttactcc
gccgcattccgctgtgcagacttaggtctggataccgtcatcatcgaacgttacaacacg
ctaggtggtgtgtgtttgaacgttggttgtattccttctaaagcactgctgcacgtggca
aaagtgattgaagaagccaaagcgctgactgagcacggtatcgtgtttggcgagccaaaa
acagacatcgacaaagttcgtctgtggaaagaaaaagtgatcaatcagctgactggtggt
ctggctggtatggcaaaaatgcgtaaagtgaacgtagtgaacggctacggtaaattcact
ggcccgaacactattgaagtggaaggcgaagagggcaaaactgtcgtaactttcgataac
gcgatcgttgctgcaggttctcgtccaatcaaactgccattcattccgcatgaagaccca
cgtatttgggattcaaccgatgcgctggaactgaaagaagtgcctggaaaactgctgatc
atgggcggcggtatcatcggtctggaaatggcgactgtttaccactcactgggttctaaa
attgatgtggttgagatgtttgaccaacttatccctgctgcggataaagatatggttaaa
gtctataccaaacgcatcaaagataagttcaacctgatgctggaaaccaaagtgaccgcc
gttgaagcgaaagaagatggtatctacgtttcaatggaaggtaagagcgcaccagcacaa
gctgagcgttacgatgcggttctggttgcaattggccgtgtaccaaacggtaaactactg
gatgctgagaaagcgggtctggaagtggacgagcgtggctttatccgcgtggataagcaa
atgcgcactaacgttccgcacatcttcgcgatcggtgacatcgtgggtcaaccaatgctg
gcacataaaggcgtgcatgaaggccacgtagcggcagaagtgatctctggtaagaagcac
tacttcgatccaaaagtgatcccatctatcgcttacactgagccagaagtggcttgggtt
ggtaagacagaaaaagaagcgaaagcagaaggcatcaactatgaagtggcgactttccca
tgggcagcttctggtcgtgcgattgcttctgactgtgcagacggtatgactaagcttatc
ttcgataaagagactcaccgtgttatcggtggcgctatcgtaggtactaacggtggtgaa
ctgctgggtgaaatcggtctggcgatcgagatgggctgtgatgcagaagacatcgcactg
accattcacgctcacccaacgctgcatgagtctgtgggtctggcggctgaagtcttcgaa
ggcaccatcactgacctgccaaacgccaaagcgaaaaagaaaaagtaa
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