Vibrio cholerae O1 LMA3984-4: VCLMA_A2244
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Entry
VCLMA_A2244 CDS
T01871
Name
(GenBank) Uncharacterized protein YtfN
KO
K09800
translocation and assembly module TamB
Organism
vcl
Vibrio cholerae O1 LMA3984-4
Brite
KEGG Orthology (KO) [BR:
vcl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcl02000
]
VCLMA_A2244
Transporters [BR:
vcl02000
]
Other transporters
Pores ion channels [TC:
1
]
VCLMA_A2244
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
T2SSN
Motif
Other DBs
NCBI-ProteinID:
AEA79438
LinkDB
All DBs
Position
I:complement(2557615..2561379)
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AA seq
1254 aa
AA seq
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MIKRALKWTKWLSMSLLVLVILLVLALAGALFTNPGLYAVLWGAQQVLPQLKVEQAQGAL
FPRFTLQGVDYADSELNLSFSVQKLSLAINPNCLLEPSICINELALSGVKLDLPSLAESE
PTPDEPDSEPLGDISTPIPIRLGQLALQDIELNILGNRVAWQQLTTRASWQGNRLRIGQT
EWQGIRLALAGSEASTEPEAVQAATSDSAEPLQLPDVMIPLHIELARFDIRDFRLEQETP
IIVNHLALQATAAQHDVSISSLELSMPELDAQLNAQATLSQDYPIQLELRSQVHLADFKG
QTLSLAAQGSLADLTVQANLDSLAQAQLNSHFNLLDADIPFDLQLSQVKAQWPMLGEGDY
HVEVPELSIQGSLAKYQFALQGALQGKDLPNVSLALQGHGNLDEVALQSLKVDTLGGLVT
GNAVANWKNPLNWAARLNLKNIQPGLQWPEAEGKISGELDTSGALTEQGGWQVEVSRLAI
KGVLRDYPLKMLGELSASDVQGQGDIALQTKGVSLVHGPNSLTAKGQLSKQWRMSVELDV
PDLSKSLPDAKGKVIGDVLLRGDLKQPRVKLVLDADSLQWQELGSIGHVTLQGNLVPLPE
PQGELTLQVRDIQYQDQRIDTVDLKAQGSQRKHEVTLDVTSDLASTSLAMNGRLRTEPTL
RWQGELERMWLNSPQGQWLLQQATALSFDQRTERVTVAAHCWAQGEASLCLEEEAELGAR
GEARLAIKQFDFKQLAGVLPKETKLSGGLNGQVWAKWAPKAAPQLQANLELTQGQVTQKL
NKSVTFGWDKAQFSAQLAKNQLQASWLLDATDNGDLSGNIQIADVRAEQKTMLGSLNLTT
FNLDFLQPLIGELNEAKSNINADVQFHGPMLHPQLNGEIAINDIRVKGEISPVDVQSGQV
SLKFNGYQAVLNADIQTTDGLLEVDGDADWQQIEDWRLKARVHAPSMMVELPPMVRVKVI
PDLTLTMQPQLARVTGNIALPWGRIVVEELPPSAIGVSKDQILLNADFEPLTDKERIPFS
VESDVNVQIGDDFQLSAFGLQGNLVGRLNVAQKDKGPFILGEVNIRNGQYRSFGQDLQIK
EGKILMNGPVDQPYLAITAIRNPNNTQDGVVAGVRVSGPSDEPSLTIFSEPAMPQANALS
YLLRGQNIDGEAGGNAMTTTLIGLSLAQSGKLVGEIGQAFGVQDLQLDTAGSGDDSQVTV
SGYILPGLQVKYGVGIFNSVGEFTVRYRLMQDLYLEAVSGVDSAVDLLYQFEFN
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacgggcgttaaagtggaccaaatggctctctatgtcgctgttggtgttagtg
atcttgctggtgctggctttggcgggggcgctgtttaccaaccccggtttgtatgcggtt
ttgtggggcgcacagcaagtattgccacagttgaaagtggagcaagcgcagggtgcacta
tttccgcgttttactttgcaaggggtcgattatgcggatagtgagcttaatctgagcttt
tctgtgcaaaagctaagcttggcgattaaccccaactgcttattggaacccagtatctgt
atcaatgagctggcgctatctggagtcaagttagatctcccctcattagcagagagtgaa
ccgacacctgatgagcccgattctgagccgctgggagacatttccacgcccatcccgatt
cgcttaggtcagttagcgctacaagatattgaattaaatattctgggtaatcgagtggcg
tggcagcaattgaccacgcgagcgtcttggcaaggcaatcgcctgcgtatcgggcaaact
gagtggcaggggatccgtcttgcgttagcggggagtgaagcctcaaccgaacccgaggcg
gttcaagcggccacctctgatagcgcagaacctttgcaactgccagatgtgatgatcccg
ctgcacattgagttagcgcgtttcgatattcgtgattttcgtttagaacaagagacgccg
atcatcgtcaatcatctagctttacaagcgactgccgcgcagcacgacgtctctatctct
agtcttgagctgagcatgccggagctggatgcgcaattgaacgcacaagcgacgctcagt
caagattatcccattcagttagaactgcgcagtcaagtgcatcttgctgattttaaaggc
caaaccttatcactggccgcgcagggcagtcttgcggatctcactgtacaagccaatcta
gactcgttagctcaagcgcagttgaacagccactttaatctgctggatgccgatataccg
tttgatctgcaactgagtcaggtgaaagcgcaatggcccatgttgggggaaggggattat
cacgttgaggttccggagttaagcattcagggctccttggccaagtatcagttcgccttg
cagggtgcgctacagggtaaagatttaccgaatgtgagtttagccctgcaagggcatggc
aatctggatgaagtcgcgttgcaatcacttaaagtcgatacgcttggcggcttagtgacg
ggcaatgctgtggcaaattggaaaaatccgctcaattgggccgctcggttaaacctgaaa
aatattcagcccggtctgcaatggcctgaagcagaaggcaagatcagtggtgagcttgat
acctctggcgctttgactgagcaaggtggctggcaagtggaggtttcacgcttagccatt
aaaggggtattacgtgattatccgcttaaaatgttaggcgaactcagcgcctccgatgtc
caagggcaaggggatatcgcgttacaaactaagggagtttccttagtgcatgggccgaac
tccctcaccgctaaaggccagttgagtaagcagtggcggatgtcggtggagttggatgtt
ccggatttgagtaaatccctacccgatgcgaaaggcaaagtgattggcgatgtgctgctg
cgaggtgatctcaaacagccacgggtcaaattggtgctggatgctgatagcttgcaatgg
caagagttaggctcgattgggcatgtaactttgcaaggaaatctcgtgccactgcctgag
cctcaaggcgagctcaccttacaagtgcgcgatattcagtaccaagatcaacgaattgat
actgttgatttaaaagcacaaggctctcagagaaaacatgaggtgacactcgatgtcacc
tctgatctcgcttcgaccagtttggcgatgaatggccgattgcgtactgaacccacactg
cgctggcaaggtgagctggagcgaatgtggttaaattcaccgcaagggcaatggttatta
caacaggcgaccgctctctcgtttgatcagagaacggaacgcgtgaccgtcgccgcccac
tgctgggctcaaggggaggcttcgctctgtttagaagaagaggccgagttaggggcgcgg
ggtgaggcgcgcttagcgattaagcagtttgattttaagcagctcgccggtgtcctgcct
aaggaaaccaaactcagtggcggcttgaatggccaagtgtgggctaagtgggctccgaaa
gcggcgccgcagttgcaagccaatcttgagttaacccaaggtcaggtaacgcaaaagctg
aataaaagcgtgacgtttggttgggataaagcgcaattttctgcccaattggcgaaaaat
cagctgcaagccagttggttattagatgcaaccgataatggtgatctctcgggcaatatc
caaattgccgatgtgcgtgccgaacagaaaaccatgctcggttcgctcaacttaaccacg
tttaatctggatttcttgcagccgttgattggtgaactcaatgaagcgaaatccaatatt
aatgccgatgtacaatttcatggcccgatgctgcatccgcaattgaacggtgaaattgcg
atcaatgatattcgcgtaaaaggtgagatctcgccggttgatgtgcaatcaggtcaggtg
tcacttaaatttaatggttatcaggcagtgttaaatgccgatatccagaccaccgatggt
ttgctcgaagtcgatggtgatgccgattggcaacagatagaggattggcgactcaaagcg
cgagtgcatgctccctcaatgatggttgagctgccacccatggtgagagtcaaggtgatc
cctgatttaaccttgaccatgcaacctcaactggcacgagtgacgggtaatatagcgctg
ccgtgggggcggattgtggtcgaagagttaccgccgagcgcgattggggtatcgaaagat
caaattttgctgaatgcggattttgagccactgactgacaaagagcggatcccgtttagt
gtggagagtgacgtcaatgtgcaaattggcgacgatttccaactcagtgcttttggtcta
caaggtaacttagtcggacggctcaatgtagcgcaaaaggataaagggccgtttattttg
ggtgaggtgaacattcgcaatggtcaataccgctcatttggacaagatctgcagatcaaa
gaagggaagatcttgatgaatggcccggtggatcagccgtatttggcgatcactgcgatc
cgtaatcccaataacacgcaagatggcgtggttgctggggtgcgagtcagtggaccctcg
gatgagccgtcactcaccatcttctctgaacctgcgatgccacaagccaatgcgctgtcg
tatttgttgcgtggacaaaatattgatggggaagccgggggcaacgccatgaccaccacc
ttgattggtctgagtttagcgcagagcggtaaactggtcggcgagataggccaagcgttt
ggtgtgcaggatctgcaactggatacggcaggttctggggacgattcgcaggtcacggtc
agtggttatattctgcccggcttgcaagtgaaatatggtgtaggtatttttaactcagtc
ggcgaatttactgtgcgttatcgcttgatgcaggatctgtatttggaggccgtctccggt
gtcgacagcgccgtagatctgctctatcagttcgaatttaactaa
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