Vibrio cholerae O1 LMA3984-4: VCLMA_A2341
Help
Entry
VCLMA_A2341 CDS
T01871
Name
(GenBank) Transcriptional regulator, PadR family
KO
K10917
PadR family transcriptional regulator, regulatory protein AphA
Organism
vcl
Vibrio cholerae O1 LMA3984-4
Pathway
vcl02024
Quorum sensing
vcl05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VCLMA_A2341
05111 Biofilm formation - Vibrio cholerae
VCLMA_A2341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcl03000
]
VCLMA_A2341
Transcription factors [BR:
vcl03000
]
Prokaryotic type
Helix-turn-helix
PadR family
VCLMA_A2341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PadR
Vir_act_alpha_C
HTH_34
Motif
Other DBs
NCBI-ProteinID:
AEA79532
LinkDB
All DBs
Position
I:2652131..2652670
Genome browser
AA seq
179 aa
AA seq
DB search
MSLPHVILTVLSTRDATGYDITKEFSASIGYFWKASHQQVYRELNKMGEQGLVTCVLEPQ
EGKPDRKVYSITQAGRSALGEWFDQPTAHPTVRDEFSAKLMACSVQSAEPYRLQLAELVE
ESRKLVAHYQEIEAAYYANPAVLDKQQRLERLTLRRNLLVRQAWILWADEVLAELNAMA
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgtcattaccacacgttatccttactgttcttagcacacgcgatgcaaccgggtacgat
ataaccaaagagttttctgctagcattggctacttctggaaagccagccatcagcaggta
tatcgtgaactcaataaaatgggggaacagggtttagtgacttgtgttctggaaccacag
gaaggcaaaccagatcgcaaggtttattctataacccaagctggccgcagcgctttaggt
gagtggtttgatcaaccaaccgcacacccaaccgtgcgtgatgagtttagtgcgaaattg
atggcttgttcagttcaatcggcagaaccttaccgtctgcaactggctgaactggttgaa
gaatcgcgtaaactggtcgctcactatcaggaaatcgaagccgcttattacgctaaccca
gccgtgttagacaagcagcaacgtttagagcgtttaacgctacgtcgtaatttactggtt
cgccaagcatggattctatgggcggacgaagtgttggcagaattgaacgcgatggcataa
DBGET
integrated database retrieval system
