Vibrio cholerae O1 LMA3984-4: VCLMA_A2399
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Entry
VCLMA_A2399 CDS
T01871
Name
(GenBank) DNA-directed RNA polymerase omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
vcl
Vibrio cholerae O1 LMA3984-4
Pathway
vcl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vcl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
VCLMA_A2399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcl03021
]
VCLMA_A2399
03400 DNA repair and recombination proteins [BR:
vcl03400
]
VCLMA_A2399
Enzymes [BR:
vcl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
VCLMA_A2399
Transcription machinery [BR:
vcl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
VCLMA_A2399
DNA repair and recombination proteins [BR:
vcl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
VCLMA_A2399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
AmiR_N
Motif
Other DBs
NCBI-ProteinID:
AEA79586
LinkDB
All DBs
Position
I:2711324..2711596
Genome browser
AA seq
90 aa
AA seq
DB search
MARVTVQDAVEKIGNRFDLVLVAARRARQMQSGGKDALVPEENDKPTVIALREIEEGLIT
KDVLDARERQEQQEQEAAELAAVSSIMHNR
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgtaacagttcaagacgctgttgaaaaaattggcaaccgtttcgacttagtt
ctggttgcggctcgccgcgctcgtcaaatgcaatctggcggtaaagatgcattggtgccg
gaagagaacgataagccaacggttatcgctctgcgcgaaatcgaagaagggctgatcacg
aaagatgtgctggatgcgcgtgagcgtcaagagcagcaagaacaagaagcggcagagctg
gctgcagttagcagcatcatgcacaaccgttaa
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