KEGG   Vibrio cholerae O1 LMA3984-4: VCLMA_A2423
Entry
VCLMA_A2423       CDS       T01871                                 
Name
(GenBank) General secretion pathway protein D
  KO
K02453  general secretion pathway protein D
Organism
vcl  Vibrio cholerae O1 LMA3984-4
Pathway
vcl03070  Bacterial secretion system
vcl05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vcl00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VCLMA_A2423
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    VCLMA_A2423
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vcl02044]
    VCLMA_A2423
Secretion system [BR:vcl02044]
 Type II secretion system
  General secretion pathway protein
   VCLMA_A2423
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0
Other DBs
NCBI-ProteinID: AEA79608
LinkDB
Position
I:complement(2735859..2737883)
AA seq 674 aa
MKYWLKKSSWLLAGSLLSTPLAMANEFSASFKGTDIQEFINIVGRNLEKTIIVDPSVRGK
VDVRSFDTLNEEQYYSFFLSVLEVYGFAVVEMDNGVLKVIKSKDAKTSAIPVLSGEERAN
GDEVITQVVAVKNVSVRELSPLLRQLIDNAGAGNVVHYDPANIILITGRAAVVNRLAEII
RRVDQAGDKEIEVVELNNASAAEMVRIVEALNKTTDAQNTPEFLKPKFVADERTNSILIS
GDPKVRERLKRLIKQLDVEMAAKGNNRVVYLKYAKAEDLVEVLKGVSENLQAEKGTGQPT
TSKRNEVMIAAHADTNSLVLTAPQDIMNAMLEVIGQLDIRRAQVLIEALIVEMAEGDGIN
LGVQWGSLESGSVIQYGNTGASIGNVMIGLEEAKDTTQTKAVYDTNNNFLRNETTTTKGD
YTKLASALSSIQGAAVSIAMGDWTALINAVSNDSSSNILSSPSITVMDNGEASFIVGEEV
PVITGSTAGSNNDNPFQTVDRKEVGIKLKVVPQINEGNSVQLNIEQEVSNVLGANGAVDV
RFAKRQLNTSVMVQDGQMLVLGGLIDERALESESKVPLLGDIPLLGQLFRSTSSQVEKKN
LMVFIKPTIIRDGVTADGITQRKYNYIRAEQLFRAEKGLRLLDDASVPVLPKFGDDRRHS
PEIQAFIEQMEAKQ
NT seq 2025 nt   +upstreamnt  +downstreamnt
gtgaaatattggctgaaaaaaagttcatggctgttggcgggcagtttgctgtctacccct
ctagcgatggcaaacgagtttagcgccagctttaaaggcaccgacattcaagaatttatc
aatattgtgggacgcaatcttgagaaaaccatcattgtcgacccttcggtacgcggcaaa
gtcgatgtgcgcagttttgataccttaaacgaagagcaatattacagtttcttcctcagt
gtgctcgaagtgtacggtttcgccgtcgttgaaatggataatggcgtactgaaagtcatc
aaatcgaaagatgcaaagacctcagccattccggtgttgagtggtgaagagcgcgccaat
ggcgatgaagtcattacccaagtggtcgcggtaaaaaacgtttccgtacgtgagttgtcc
cctttgctgcgccaactgattgataacgcaggagcgggtaacgtagtgcactacgatcca
gcgaacatcattttgatcacggggcgagctgcggtagtgaaccgtttagcggaaattatt
cgtcgcgttgaccaagccggtgacaaagagattgaagttgttgagcttaataatgcatcg
gctgctgaaatggtgcggattgttgaagcgctcaacaaaacgacagacgcgcaaaacacc
cctgaattcttaaagcccaagtttgtggcagacgagcgtaccaactcgattttgatttct
ggtgatccgaaagtgcgcgagcgcctcaagcgtctgatcaagcagttggatgtcgagatg
gcggccaaaggcaataaccgcgtggtgtatttgaaatacgctaaagctgaagatctggtc
gaagtactgaaaggggtgtctgagaacctgcaagcggaaaaaggcaccggacagccgacc
acttcaaaacgtaatgaagtgatgattgccgcgcacgctgacaccaactcgttagtgctt
actgcgccgcaagacattatgaatgcgatgctggaagtgattggacagctagatattcgc
cgtgcgcaagtgttgattgaagcgctgattgtcgaaatggcagagggcgatggtatcaac
cttggtgtgcagtggggctcgctggaaagtggttcagtcatccaatatggcaacactggc
gcgtcgattggcaatgtgatgattggtcttgaagaagccaaagacacaacccaaaccaag
gcggtttatgatactaataacaacttcttgagaaatgaaacgacgaccaccaaaggggat
tacaccaagttagcctctgcattgtcgagcattcaaggtgctgcagtcagcatcgcgatg
ggcgactggacggccttaatcaacgcggtctctaatgattccagctcgaatatcctgtca
tcacccagcattacggtgatggataacggtgaagcctcctttatcgtgggtgaagaagtg
ccggttatcacaggttctactgcaggctctaataacgacaacccattccaaaccgtggat
cgtaaagaagtcggtatcaagcttaaagtggtgccgcagatcaacgaaggtaactcagtc
cagctcaatattgagcaagaagtctcgaacgtgttgggcgccaatggagcggtagacgtg
cgttttgcgaagcgtcagctcaacacttctgtgatggtgcaagatgggcagatgttggtg
ctcggcggtttgattgatgagcgagctctcgagagtgagtcgaaagtcccgctcttgggg
gatattcctctgctgggtcaactgttccgctcaaccagctcgcaagtggaaaagaaaaac
ctgatggtgtttatcaagccgaccattattcgtgatggcgtgacggccgatggcatcacc
caacgtaaatacaactacatccgcgccgagcaactgttccgcgccgaaaaaggtttacgt
ctgctggatgatgctagtgtgcctgtgttgccgaaatttggcgatgaccgccgccattca
cctgaaattcaagcctttattgagcagatggaagccaagcaatga

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