Vibrio cholerae O1 LMA3984-4: VCLMA_A2465
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Entry
VCLMA_A2465 CDS
T01871
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
vcl
Vibrio cholerae O1 LMA3984-4
Brite
KEGG Orthology (KO) [BR:
vcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcl03016
]
VCLMA_A2465
03036 Chromosome and associated proteins [BR:
vcl03036
]
VCLMA_A2465
Transfer RNA biogenesis [BR:
vcl03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
VCLMA_A2465
Prokaryotic type
VCLMA_A2465
Chromosome and associated proteins [BR:
vcl03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
VCLMA_A2465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C_1st
SAM_GIDA_C
FAD_oxidored
FAD_binding_2
Pyr_redox_2
Pyr_redox_3
HI0933_like
Thi4
AlaDh_PNT_C
DAO
Pyr_redox
NAD_binding_9
Motif
Other DBs
NCBI-ProteinID:
AEA79650
LinkDB
All DBs
Position
I:complement(2789730..2791625)
Genome browser
AA seq
631 aa
AA seq
DB search
MLYHETFDVIVVGGGHAGTEAALAAARTGQRTLLLTHNIDTLGQMSCNPAIGGIGKGHLV
KEVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRNVLENTPNLTL
FQQAVDDVIVEHDHIRGVVTQMGLKFHAKAVVLTVGTFLGGKIHIGLENYAGGRAGDPPS
IALAHRLRELPFRVDRLKTGTPPRIDANSVDFSVLEAQHGDNPTPVFSFMGKREHHPRQI
PCYITHTNERTHDVIRANLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADKDSHQIFIEPE
GLTTTELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETK
FIHGLFFAGQINGTTGYEEAAAQGLMAGLNASLYSQDKEGWSPRRDQAYMGVLIDDLSTM
GTKEPYRMFTSRAEYRLLLREDNADLRLTEKARELGLVDDARWVRFNQKIDNMAKERQRL
QETWMNPNSVGVEQLNTLLKTPMSREASGEDLLRRPEMTYELLTTLPAFAPALEDAEAAE
QVEIQVKYDGYIQRQQDEIEKSLRHEHTKLPAELDYKQVKGLSNEVVLKLNAAKPETIGI
ASRISGITPAAISILLVHLKKHGMLKKGEAA
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgctttatcacgaaacatttgacgtcattgtggttggtggcggtcacgcaggaacggaa
gccgctctcgctgcagcacgtacaggacagcgtacgttacttcttacccacaatattgac
accctaggccaaatgtcctgtaaccctgccattggtgggatcggtaaaggtcatttagtc
aaagaagtggatgcaatgggcggtttgatggcgcaagctatcgatcacgcaggtattcaa
tttcgtacactgaacgcttcaaaagggccagccgtgcgtgcaactcgtgcacaagccgat
cgtgctctgtacaaagcctatgtgcgtaatgtgttagaaaacaccccgaatctcaccctg
ttccaacaagcggtagatgatgtgatcgtcgagcatgatcatattcgtggtgttgtgact
cagatgggcctgaaatttcatgccaaagcggtagtgttaaccgtcgggactttccttggc
ggtaagatccatatcggccttgaaaactatgctggaggtcgtgctggggatccgccatcg
atcgctttggcgcaccgactgcgtgaactgccatttcgtgttgatcgcttaaaaaccggc
acaccaccacgtatcgatgccaatagcgttgatttctcggtattggaagcgcagcacggt
gataatccgaccccagttttttccttcatgggcaagcgtgagcaccatccacgccaaatt
ccgtgttacataacgcacaccaatgagcgcacccatgatgtgatccgagctaaccttgat
cgcagccctatgtatgccgggatcatcgaagggatcggcccgcgttactgtccatcgatc
gaagataaagtgatgcgttttgccgataaagacagtcaccaaatttttattgagccagag
ggtttaaccaccactgaactctatccgaacggcatttccaccagcttgccatttgacgtg
caagtgcaaatcgtacgttcaatgaaaggttttgagaacgcacatatcgttcgtccgggt
tacgcgattgaatacgacttcttcgatccacgtgatttgaagcaaacgtatgaaaccaaa
tttatccatggtttgttctttgcaggacaaatcaacggcactactggttacgaagaagcc
gctgcgcaaggcttgatggcgggtctgaacgccagcttgtacagccaagacaaagaaggt
tggagtccacgtcgcgatcaggcgtacatgggggtgttgatcgacgatctttcgaccatg
ggcactaaagagccttaccgtatgttcacttcgcgcgcggaatatcgtctgctgctgcgt
gaagacaacgctgatctgcgtttgaccgaaaaagcgcgtgagcttggccttgtggatgat
gcgcgttgggtgcgtttcaaccaaaaaatcgacaacatggccaaagagcgtcaacgcttg
caagaaacttggatgaatccaaactcggttggcgtcgaacagctcaatactctgctgaaa
acgccgatgtcgcgtgaagccagtggtgaagacttactgcgtcgccctgaaatgacctat
gagctgctgaccactttgccggcttttgccccagctttggaagatgctgaagccgccgaa
caggtagagattcaagttaaatacgatggctacattcaacgccagcaagatgaaattgaa
aaatcgctgcgccatgaacataccaagctgccagcagagcttgattataagcaagtcaaa
ggtctttcaaacgaggtggtattgaagctcaatgccgctaaaccagaaaccattggaatt
gcatcacgtatttcaggtatcacgcctgcggcgatttcgattttgctggttcacctgaaa
aaacacggcatgctgaaaaagggagaagcggcgtaa
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