Vibrio cholerae O1 LMA3984-4: VCLMA_B0013
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Entry
VCLMA_B0013 CDS
T01871
Name
(GenBank) 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
vcl
Vibrio cholerae O1 LMA3984-4
Pathway
vcl00500
Starch and sucrose metabolism
vcl01100
Metabolic pathways
vcl01110
Biosynthesis of secondary metabolites
Module
vcl_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
vcl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
VCLMA_B0013
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vcl04147
]
VCLMA_B0013
Enzymes [BR:
vcl01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
VCLMA_B0013
Exosome [BR:
vcl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
VCLMA_B0013
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase_C
GlgB_N
Alpha-amylase
Motif
Other DBs
NCBI-ProteinID:
AEA79662
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Position
II:17193..19382
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AA seq
729 aa
AA seq
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MKITKKPSKVQQFYDQLARAAFADPFSFLGPYIPAEQGALRVWMPGADNVALVVEGQARV
ALDREGEGGFVLKDGRNLRFTHYQLAVDWAGTEQLLDDPYQYHGLYAEYEDLHTPKQMYH
HMGAQFVTLERDGKMVSGVRFLVYAPHAAACSLIGAFNHWDGRRHPMQRLDYGIWGIFIP
GLPEGTQYKFELKGPHGEGLPHKADPWGFYAEQYPSFASVTYDHRRYQWQDTAWQQRPVT
EKRKQALSFYELHVGSWKRGENGEFLNYRELADQLVPYLVEMGYTHVELMPVAEHPFYGS
WGYQPVGLFAPTSRYGSPDDFKYFVDLCHQAGIGVVLDWVPAHFPSDSHGLANFDGTPLF
HDPDPRRGWHQDWNSYIYDLGREHVRRFLVANALYWFEMFHIDGIRVDAVASMLYLDYSR
SHDQWIPNVDGGRENYDAIATFKWMNEEVYKHFPNAMTIAEESTAFPGVSAPTFMGGLGF
GFKWNMGWMHDSLSYIKEDPVHRKYHHNTLTFPLIYAFSENYVLSLSHDEVVYGKRSLMY
KMPGDEWQQTANLRAYLGYMYGQPGKKLNFMGTELGQTAEWDHDGQLQWFLTQFERHSGI
QRLVRDLNHLYQAQTALHQLDCDPRGFEWRLQDNADLSMIAHERMDEAGNRVLVITNFTP
VPQQAFRLGVPKTGKYRLLLNTDAKQYNGSDYPVLQDVSTEAISSEGLDQSLLLSVPPLA
TLFYQWSAK
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
ttgaagatcacaaaaaaaccatccaaggttcaacaattttatgatcagttggcgcgtgca
gcgtttgctgatcccttttcatttctaggcccttacattcccgctgaacaaggtgcgctg
cgagtgtggatgccgggtgctgacaacgtcgcgttggtggttgaagggcaagctcgtgtg
gcgttagatcgtgaaggcgagggcggctttgtgctgaaagatggccgtaatctgcgtttt
acgcactaccaattggctgtcgattgggcgggtaccgagcagttactcgatgatccgtat
caatatcacggcctctacgctgaatatgaagatctgcatacgccaaagcagatgtatcac
catatgggggcgcagtttgtcaccctagagcgtgatggaaaaatggtctctggcgtacgt
tttctggtgtatgcccctcacgcggcggcgtgcagtttgattggcgcgtttaaccattgg
gatgggcgtcgccatccgatgcagcgtctcgattacggtatttggggaatttttattcct
ggcttgccggaaggcacgcaatacaaatttgagctgaaaggcccacatggagaaggtctg
ccgcataaagcggatccgtggggtttttatgctgagcaatacccttcttttgcttctgtg
acttatgatcatcgtcgttatcagtggcaagatacggcttggcagcagcgccctgtgact
gaaaagcgtaaacaagcgctctcgttttatgagctgcacgttggctcatggaagcgaggc
gaaaacggtgaattcctcaattatcgtgaattggccgatcaattggtgccttatctggtt
gagatgggttatacccatgttgagttaatgcccgtcgctgagcacccattctatggctct
tggggctatcaaccggttggtctgtttgcgcccactagccgttacggctcgccagatgat
ttcaaatattttgtcgatttgtgccaccaagcggggattggtgtggtgctcgattgggtg
cctgcgcacttcccatcagattctcacggtctggccaattttgatggcacgcccttattc
catgatccggatccacgtcgcggttggcatcaagactggaactcttacatctacgatctt
ggtcgcgagcatgtgcgccgtttcttagtcgctaatgcgctgtattggtttgagatgttc
catatcgatggcattcgcgttgatgcggtcgcgtcgatgctctatctcgattattcgcgt
agccatgatcaatggatcccgaatgttgatggtggacgtgaaaactacgatgcgattgct
accttcaaatggatgaacgaggaggtgtacaaacacttcccgaatgcgatgacgattgcc
gaagagtcgaccgcgtttcctggcgtttctgccccgacctttatgggcggcctcgggttt
ggttttaagtggaacatgggctggatgcacgatagcttgtcgtacatcaaagaggatccg
gtgcatcgcaaataccaccacaataccctgactttcccgctgatttacgcgtttagtgaa
aactatgtgctctctttatcacacgatgaagtggtgtatggtaagcgctcgcttatgtac
aagatgccgggtgatgagtggcagcaaaccgccaacttacgcgcctacttgggttatatg
tatggtcagccgggcaaaaaactcaactttatgggtaccgagttaggacagactgcggag
tgggatcacgatggtcagttgcagtggttcttaacgcaatttgagcgccattcggggatc
cagcgtttggtgcgtgatttgaaccatctgtaccaagcccaaacggcgttgcatcagctt
gattgcgatccgcgcggcttcgaatggcgcttacaagataatgccgatctcagcatgatc
gcccatgaacggatggatgaagccggtaatcgtgtgttagtgatcaccaacttcacgcct
gttccacagcaggcatttcgcttaggtgttcctaaaacagggaagtaccgcttgttgctc
aataccgatgccaagcagtacaacggcagtgattatccggtattgcaggatgtgagtacg
gaagcgatcagcagtgaaggtttggatcaatcgctgctattgagtgtgccgccgctcgcg
acgctattttatcaatggagtgcgaagtag
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