Vibrio cholerae O1 LMA3984-4: VCLMA_B0049
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Entry
VCLMA_B0049 CDS
T01871
Name
(GenBank) Deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
vcl
Vibrio cholerae O1 LMA3984-4
Brite
KEGG Orthology (KO) [BR:
vcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcl03400
]
VCLMA_B0049
Enzymes [BR:
vcl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
VCLMA_B0049
DNA repair and recombination proteins [BR:
vcl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
VCLMA_B0049
Prokaryotic type
VCLMA_B0049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AEA79697
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Position
II:61614..63023
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AA seq
469 aa
AA seq
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MRLVWFRRDLRSFDNTALTAALNSGDPVAAMYIATPEQWHQHHLAPIQADLIWRRLAELQ
QELAALNVPLFYQQVADFQAAAVAVSQLAKTLNAIQVLANRDYELDEQQRDQSAQQLLSE
QGITWSAFDDKCVLPPGSVRTKQGEFFKVFTPFKRAWLTLFQPPVIGKNRPAALWDVPSA
LAELVWHPEQTFDYPRVDSTPWAADFETVRAQLRGFCRERVQDYHQARDFPAREGTSSLS
PYLAIGVLSARQCVARLYHESSMGELSEGAQVWLSELIWREFYQHLVAIEPNLSKSRDFV
EWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVASFLTKDLHID
WRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRIFNPVSQGEKFDPNGDFIRRW
VPELRSVSSAYIHQPWTYPAVNSVLYPARLVDHKQEREVTLRLYKTAKG
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgagactggtttggtttcgtcgtgatctgcgcagctttgataatacagcgctcaccgcc
gcgttaaacagtggcgatccggttgcggcgatgtatatcgctactccagagcagtggcat
cagcaccatctagcgcctattcaagccgatttgatttggcgacgtttggcagagttgcaa
caagagcttgctgcgcttaacgtgccacttttttatcagcaagtcgcggattttcaagcg
gcggctgtggcggttagccagttagcgaaaacgcttaatgccatacaagttctcgccaat
cgtgattacgaattggacgagcagcaacgtgatcaatcggcacagcagttactgagcgaa
caagggataacatggtctgcttttgatgataaatgcgtattacctcccggttcggtgcgc
acgaaacagggcgaattttttaaagtgttcacccctttcaagcgcgcatggctcactctt
tttcagccgcctgtgattggaaaaaatcgtcccgcagcgctttgggacgtaccgagtgcg
ttggccgaattggtttggcatccagaacaaacattcgattaccccagagtagacagcacg
ccatgggctgcggactttgagactgtgcgcgctcaattgcgtggtttttgccgtgaacga
gtgcaggactaccatcaagcgcgtgattttccggctagggaaggcaccagttcgctctca
ccctacttggcgattggcgtgttatcggcgcgtcaatgcgtggctcgcttgtatcacgag
tcatcaatgggcgaactcagtgaaggggcacaagtctggttgagcgaactcatctggcgt
gagttttaccagcatttggttgcaattgagcctaatctttcgaaaagtcgtgactttgtg
gagtggggggcgcgtttggagtggtggaatgataacgaaaagtttcagctctggtgtgaa
ggcaagacagggtatccgatcgtcgatgcggcaatgcgccaactgaaccaaaccggatgg
atgcacaatcggttacggatgatcgtggcgagctttcttaccaaagatctgcacatcgac
tggcgctggggcgagcgctatttcatgagtcgcctgattgatggtgattatgcggccaac
aatggtggttggcagtggtgtgcatccactgggtgtgatggacagccctattttcggatt
tttaatccggtcagccagggggagaaatttgacccgaatggcgacttcatccgccgttgg
gtgccggagctgcgttcagtctcttcggcttatattcaccaaccttggacttatccggct
gtcaatagcgtgttatatcctgcgcgactagttgatcataagcaggaaagagaagtaacc
ttacgtctgtataaaacagcgaagggataa
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