Vibrio cholerae O1 LMA3984-4: VCLMA_B0117
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Entry
VCLMA_B0117 CDS
T01871
Name
(GenBank) Ribose operon repressor
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
vcl
Vibrio cholerae O1 LMA3984-4
Brite
KEGG Orthology (KO) [BR:
vcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcl03000
]
VCLMA_B0117
Transcription factors [BR:
vcl03000
]
Prokaryotic type
Helix-turn-helix
LacI family
VCLMA_B0117
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_38
HTH_Tnp_ISL3
HTH_3
HTH_24
MarR_2
HTH_Crp_2
HTH_31
TetR_N
HTH_19
Motif
Other DBs
NCBI-ProteinID:
AEA79763
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Position
II:144264..145301
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AA seq
345 aa
AA seq
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MATMKDIARLAGVSTSTVSHVINKSRFVSDEIAERVNNAAQQLNYAPSALARSLKMNRTK
TIGMLVTTSTNPFFGEVVKGVERSCYHQGYNLILCNTEGDNQRMKASINTLLQKRVDGLL
LMCSTLEGERLDVFDRYPDIPIVVMDWGPILFASDKIQDNSLQGGYMAAKHLIECGHKEI
GCITGPLIRHQAQMRYEGYKRALAEAGIAINPDWIVESDFECEGGYQAFEKLYQRGKLPS
ALFVSNDMMAMGVIQAASQRGLRVPDDLSLIGYDDVHIAKFMTPALTTIHQPKYRLGKAA
IDTLLYRLENPDTTAQVVQLEPTLVVRSSVPKRTNVLSLSSYCSL
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatgaaggatatcgctcgacttgctggcgtctccacttcaaccgtaagccat
gtgatcaataagagtcgttttgtgagtgatgaaattgctgagcgggtgaataacgccgct
cagcaactcaattacgccccctccgctctcgcgcgtagcctcaaaatgaaccgcaccaaa
accattggcatgttagtgaccacctcgaccaacccattttttggtgaagtggtaaaaggt
gtagagcgaagctgttatcaccaaggctacaacctaatcttgtgcaataccgaaggggat
aaccaacgcatgaaagccagcatcaacaccttgctgcaaaagcgtgtcgatggtttgctg
cttatgtgctcaacccttgagggtgaaaggttggatgtgtttgaccgctatcccgacatt
cctattgtggtcatggactggggcccgatcctgtttgcgagtgacaaaattcaagacaac
tcactgcaaggtggctacatggcggccaagcatctgattgagtgtgggcataaagagatt
ggttgtatcacaggtccgctgattcgccaccaagcacagatgcgttatgaaggttacaaa
cgtgcgctcgcggaagcgggaattgccattaatccagattggattgtggaatctgacttc
gagtgtgaaggcggctaccaagcctttgaaaaactctatcagcgtggcaaattgcccagt
gctttgtttgtttccaatgacatgatggcgatgggcgtgattcaagccgctagccaacga
ggtttgcgagtgccggacgatctttccttgattggctacgatgatgtgcatatcgctaag
tttatgaccccggcgttaaccaccatccatcaacccaaataccgcctcggcaaagccgcc
atcgatactctgctttatcgcttggaaaatccagacactaccgcgcaagtggtacagtta
gagccgactttagtggtgcgtagcagtgtacccaagaggacaaatgtcctctcgctttcc
tcatattgttccttatag
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