Vibrio cholerae O1 LMA3984-4: VCLMA_B0384
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Entry
VCLMA_B0384 CDS
T01871
Name
(GenBank) Putative ABC transporter ATP-binding protein
KO
K13896
microcin C transport system ATP-binding protein
Organism
vcl
Vibrio cholerae O1 LMA3984-4
Pathway
vcl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vcl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VCLMA_B0384
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcl02000
]
VCLMA_B0384
Transporters [BR:
vcl02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Microcin C transporter
VCLMA_B0384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
oligo_HPY
AAA_16
AAA_29
AAA_22
ATP-synt_ab
AIG1
AAA_7
Mg_chelatase
nSTAND3
DEAD
SbcC_Walker_B
DUF87
NACHT
P-loop_TraG
AAA_25
AAA_13
Sigma54_activat
Motif
Other DBs
NCBI-ProteinID:
AEA80023
LinkDB
All DBs
Position
II:complement(420306..421898)
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AA seq
530 aa
AA seq
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MNDWVLKIDNLSVGFGIAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRLLP
KGSAHYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLA
IHRGLRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIA
DEPTTALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNA
CHTLFAAPAHPYTQQLINADPRGVPVPIAMDAPTLLQAEKLRVWFPIKGGFFRRTQAYIK
AITDMSFTLAKGQSLGLVGESGSGKSTTGMAILKLLDSQGAIRFAGQDLQALKRREMLPY
RSKMQVVFQDPYSALNPRMSVAQVIGEGLRVHSQLSDDEIDHAICAVMQEVGLDVDTRHR
YPNEFSGGQRQRIAIARALVLKPEFILLDEPTSSLDRTVQAQVLDLLKDLQQKYQLTYLF
ISHDLAVIRALCHHTIVMKAGEIVEHGETQSLFENPSHPYTQQLVRLSLL
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgaacgattgggtattgaaaatagataacctgtcggtgggttttggtatcgcagggcag
gcacgccctgtgactgaaggggtaagcttaaccattgcgcgtggtgaaacgttggctttg
gtgggagaaagtggctcgggaaaatccgtgacagccaacgcgattttgcgtttgttgccc
aaaggatcggcgcactatttaagtggcagcattcattttggcgatgttgataccctgcgc
tgctcagagcgcgcgctgcgcggcatccgcgggggacgcatagggatgatttttcaagag
ccgatggtctcgcttaatcctctgcacaaaattggaaaacagttggtggaaaccttagcg
atccatcgaggattacgtgcaacggcagcagagcaaaaagcgattgaatggcttggcaag
gtggggattcgtcatcctgaaattaagattaatgcctatccgcatgaactctccggtggt
gagcggcaacgtgtgatgattgccatggcgctaatcaatgaacccgagctactgattgcc
gatgaacctaccacggcattagatgtttcggtacaagcgcagattttggatttacttaaa
tctctgcaacaagaattgggcatggcgatgttgttcattacccatgatttgagcatagtg
cgccgaattgctgaccgagtggcggtgatgcaaagtggccaattggtcgaaactaacgcg
tgccacactttgtttgctgcgcctgcacacccctatacccagcagttgatcaatgccgat
ccgcgtggtgtgcccgtccctatagcgatggatgctccgacgctgctgcaagcggaaaag
ttacgggtgtggtttccaatcaaaggcggtttttttcgccgcactcaagcctatattaaa
gcgattacagatatgagtttcaccttggccaaagggcaatcgttgggtttggtgggggaa
agtggttcagggaaatcgaccacgggcatggcgattctcaagcttctcgactcacaaggg
gctatccgttttgcagggcaagatctgcaagctctcaaacgccgtgaaatgctgccgtat
cgcagtaaaatgcaggtggtgtttcaagacccatattctgcgcttaatcctcgaatgtcg
gtggcgcaagtgataggtgagggtttacgcgtgcatagccagcttagtgatgacgagatt
gatcacgcgatttgcgcggtgatgcaggaagtcggcttagatgtagacactcggcatcgc
tatcccaatgaattttctggtggccaacggcagcgtatcgcgattgcgcgtgcgttggtg
ctcaagcctgagttcatattgcttgatgagccaacctcatcgctagaccgaactgtacaa
gcgcaagtactggatttgctgaaagatttgcagcagaaataccaattaacctatctgttt
attagccatgatctcgcggtgatccgcgctttatgtcaccacaccatagtgatgaaagcg
ggggagattgtcgaacatggtgaaactcaaagcctatttgagaatccaagtcacccttat
acgcagcagctagtgcgtctttcgctgctgtaa
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