Vibrio cholerae O1 LMA3984-4: VCLMA_B0812
Help
Entry
VCLMA_B0812 CDS
T01871
Name
(GenBank) Ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
vcl
Vibrio cholerae O1 LMA3984-4
Pathway
vcl00330
Arginine and proline metabolism
vcl00480
Glutathione metabolism
vcl01100
Metabolic pathways
vcl01110
Biosynthesis of secondary metabolites
vcl04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
vcl00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
VCLMA_B0812
09106 Metabolism of other amino acids
00480 Glutathione metabolism
VCLMA_B0812
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
VCLMA_B0812
Enzymes [BR:
vcl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
VCLMA_B0812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
GKRP_SIS_2
Motif
Other DBs
NCBI-ProteinID:
AEA80429
LinkDB
All DBs
Position
II:complement(887819..889981)
Genome browser
AA seq
720 aa
AA seq
DB search
MNSLKIATSLSVRSCFTTQREVVDVLKTDFCDIGAAVVSVEDVQNGIIDKMNATGLKLPI
FVAVCCEDQFPDDFCADITGVFELCDAKVEFYGKQVETAVRRYQESLLPPFFGTLKKYVD
MGNSTFACPGHQGGQFFRKHPVGRQFFDFFGETLFRSDMCNADVRLGDLLIHEGAPHDAQ
AYAAKVYNADKTYFVLNGTSASNKVVCNALLTPGDLVLFDRNNHKSNHHGALIQAGATPV
YLETARNPFGFIGGIDAHCFNESYLRDAVRNVDPSRAEAKRPFRLAIIQLGTYDGTIYNA
RQVVDRIGHLCDYILFDSAWVGYEQFIPMMKDCSPLLLELKPEDPGIIVTQSVHKQQAGF
SQTSQIHKKDHHIKGQERYCNHKRFNNAFMLHASTSPFYPLFAALDVNAKMHEGDSGRYL
WREAVKTGIEARKLLMKKCKYIKPFIPPMIEGKPWQSHPTEQIADDLRFFEFEPGQKWHA
FEGYEHGQYFVDPCKFLLTTPGIDPETGEYEHFGIPATILANFLRENNIIPEKCDLNSIL
FLLTPAEDMAKMQHLVAQIARFERLIEEDAPLSEVLPNVYRANRERYKGYTIRQLCQEMH
DLYVSHDVKQLQKEMFRARYFPRAVMNPQEANLAFVRGQVELVPLREVEGRIAAEGALPY
PPGVLCVVPGEIWGGSVQRYFLALEEGINLLPGFAPELQGVYLEPTGEGRVQAMGYVLKR
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaattcattaaaaattgctacgagtttatcggttcgctcttgcttcacaacccaacgt
gaagtggtggatgtactgaaaaccgacttctgtgacattggtgcggcggtggtttccgtc
gaagacgtacaaaacggcatcatagataaaatgaatgcgaccggtttgaaactgccgatc
tttgttgctgtgtgctgcgaagaccaattcccagatgatttttgcgccgatatcaccggg
gtatttgagctgtgtgatgccaaagtcgagttctacggtaagcaagtggaaactgccgtg
cgtcgttatcaagaaagtttgttgccacctttctttggcacattgaaaaaatacgtggac
atgggtaactcgacctttgcttgcccaggccatcaaggtggtcagttcttccgtaagcat
ccggttggtcgccagttctttgatttctttggtgaaaccttattccgctcggatatgtgt
aacgcagacgtgcgtttgggtgacttgctgatccatgaaggcgccccacatgatgcgcag
gcttatgctgcgaaagtgtacaacgcggataaaacctacttcgtactcaacggcacatcg
gcctccaacaaagtggtgtgtaacgcgctgctgacaccgggagatttggtgctgtttgac
cgcaataaccataaatccaaccaccacggtgcgttaattcaagctggggctactccggtt
tacttagaaaccgcgcgtaacccatttggttttatcggcgggattgatgcgcactgcttt
aacgagtcttacctgcgtgatgcggtacgtaatgtcgacccaagccgcgcggaagcgaaa
cgtccattccgtcttgccatcattcagctcggtacttacgacggcacgatttacaacgcg
cgtcaggtggtcgatcgcatcggtcatctgtgtgattacatcctgtttgactcagcatgg
gtgggctatgaacagttcattcccatgatgaaagactgctcaccacttcttctcgaactg
aagcctgaagatccgggcatcatcgtcactcagtccgtgcataaacagcaggcgggtttc
tcacaaacttcgcaaatccacaagaaagatcaccacatcaaaggtcaagagcgttactgc
aaccataaacgctttaacaacgcctttatgctgcacgcatcaaccagcccattctacccg
ctatttgcggcgctcgatgtgaacgccaagatgcacgaaggggacagtggccgctaccta
tggcgtgaagcggtaaaaaccggtatcgaagcccgtaagcttctaatgaaaaaatgcaaa
tacatcaagccgttcattccaccaatgatcgaaggtaaaccttggcaatctcaccccacc
gagcaaatagccgatgatttgcgtttctttgaatttgaaccgggtcagaaatggcatgcg
tttgaaggttacgaacatggtcagtatttcgttgacccttgtaagttcctgctcaccaca
ccggggattgacccagaaaccggcgaatacgagcactttggtattccggccaccatactg
gccaacttcctgcgtgagaacaacatcatcccagagaagtgcgatttgaactcgatcctc
ttcttgctcacccctgccgaagatatggcgaagatgcagcatttagtggcgcaaattgcc
cgttttgaacgcttgattgaagaagatgcaccactgagcgaagtattgccgaacgtgtac
cgcgcgaatcgcgaacgctacaaaggctacaccatccgtcagttatgtcaggaaatgcac
gatctgtatgtcagccatgatgtgaaacagctgcaaaaagagatgttccgcgcgcgttat
ttcccacgtgcggtaatgaacccacaagaagcgaacttggcctttgtacgtggtcaggtt
gagctagtcccactgcgtgaagtggaaggccgtatcgccgctgaaggcgcactgccttac
cctccgggtgtgttgtgtgtggttccgggagaaatatggggcggttcagtacagcgttac
ttcctcgctctagaagaaggcattaacttgctgccgggttttgcgcctgaattgcaaggg
gtttatctggagccgacaggcgagggacgagtgcaagccatgggctatgtactgaaacgt
taa
DBGET
integrated database retrieval system