Vibrio cholerae O1 M66-2: VCM66_0061
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Entry
VCM66_0061 CDS
T00891
Symbol
thiC
Name
(GenBank) thiamin biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
vcm
Vibrio cholerae O1 M66-2
Pathway
vcm00730
Thiamine metabolism
vcm01100
Metabolic pathways
vcm01240
Biosynthesis of cofactors
Module
vcm_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
vcm00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
VCM66_0061 (thiC)
Enzymes [BR:
vcm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
VCM66_0061 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ACP04397
UniProt:
C3LPQ3
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Position
I:59953..61890
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AA seq
645 aa
AA seq
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MSNRKQARLEAKRFIDTLSVEPYPNSQKSYLLGSRPDIRVPVREITLSDTLVGGSKDAPI
FEPNEPICVYDTSGVYTDPSHDIDLYKGLPKLREEWIEERRDTHILPSMSSHFARERLAD
ETLDELRYGHLPRIRRAMGQHRVTQLHYARQGIITPEMEFVAIRENSRRLAHQDPSLLQQ
HAGQNFGAHLPDLITPEFVRREIAEGRAIIPCNINHPESEPMIIGRNFLVKVNANIGNSS
VSSSIEEEVEKLVWATRWGADTVMDLSTGRNIHETREWILRNSPVPIGTVPMYQALEKVN
GVAENLTWEVMRDTLLEQAEQGVDYFTIHAGLLLRYVPMTAKRVTGIVSRGGSIIAKWCL
SHHQENFLYTHFREICEICAQYDVALSLGDGLRPGSIADANDEAQFAELRTLGELTQIAW
EYDVQVMIEGPGHVPMHLIKANMDEQLKHCHEAPFYTLGPLTTDIAPGYDHITSGIGAAM
IGWFGCAMLCYVTPKEHLGLPNKEDVKTGLITYKLAAHAADLAKGHPGAQIRDNALSKAR
FEFRWEDQFNLALDPVTARAFHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDYANNQ
TLDTTVIDLVMPAESIQLAMQDKSREFLASGAELYHPLVKEPIEE
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccgtaaacaagcaagactggaagccaagcgctttattgataccctttctgtt
gaaccctatcctaactctcaaaaatcttacctattaggctctcgccctgatattcgggtg
cctgtcagagaaattactctcagcgatactttggtcggtggcagtaaagatgcacccatc
tttgagcccaatgagcctatctgtgtgtatgacacatctggcgtctatactgacccttca
catgatattgatctctacaaggggcttcctaagctcagagaggagtggattgaagagcgt
cgagatacgcacattctgcctagtatgagctctcatttcgcccgtgaacgcttagcggat
gaaactctagatgaactgcgttatggccatttaccgcgaattcgccgagcgatgggccag
catcgagtcactcagttacattacgcacggcagggaatcattacgccggaaatggagttt
gtggcgatccgtgaaaactctcgtcgtcttgctcatcaagatccaagtctacttcagcag
catgctgggcagaattttggtgctcatttacccgatctgattactcctgagtttgtgcgt
cgtgagattgcagaagggcgcgccatcatcccatgcaatattaatcatcctgaatctgaa
cccatgattattggccgcaatttcttggttaaggtgaatgccaatatcggtaactcttct
gttagctcttctattgaagaagaagtcgagaagttagtttgggcgacccgctggggcgca
gatactgtgatggatctgtcgacagggcgaaatatccatgaaacccgcgagtggatctta
cgtaatagccccgtgccaattggtactgtacctatgtatcaggcgctggaaaaagtgaat
ggtgtagcagaaaacctcacatgggaagtgatgcgcgataccttactagagcaagctgag
caaggtgtggactattttacaattcatgcgggcttgctattgcgttatgtgccgatgaca
gccaagcgcgtaacgggcatcgtttctcgtggcggctcgattattgcgaaatggtgtctt
tctcaccatcaagagaatttcctttatacccattttcgcgaaatctgtgagatttgtgcg
caatatgatgtggctctatctctaggggatggacttcgtcctggctcgattgctgatgct
aacgatgaagcgcaatttgctgagttacgtacccttggtgagctaacccaaatagcttgg
gaatatgatgtgcaggtcatgattgaagggccgggtcatgtacctatgcacttaattaaa
gccaatatggatgagcagcttaagcattgtcatgaggcgccattctatacccttggtcca
ttaactaccgatattgccccgggttatgatcacattacctccggtatcggtgcggccatg
attggttggtttggctgcgccatgctctgctatgtcacacctaaagaacatttggggctg
ccaaacaaagaagatgtcaaaacaggattgattacttataagttagcggctcatgcagca
gatttggcgaaagggcatccgggagcgcaaattcgtgataatgcattatcaaaagcacgt
tttgagtttcgttgggaagaccagttcaatcttgcgcttgatcccgtcacagcacgcgct
ttccatgatgagaccctaccgcaggaatcgggcaaagtcgcgcacttttgctctatgtgt
ggccccaaattctgctcgatgaagatctcgcaagaggtcagggattacgcaaataaccag
acattagacaccaccgtcattgacttggttatgcctgcagaatctatacagctggcgatg
caagataagtctcgtgagtttttagcctcaggtgctgaactctatcatcctttggtgaaa
gagccgatcgaggagtaa
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