Vibrio cholerae O1 M66-2: VCM66_0108
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Entry
VCM66_0108 CDS
T00891
Symbol
polI
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
vcm
Vibrio cholerae O1 M66-2
Pathway
vcm03030
DNA replication
vcm03410
Base excision repair
vcm03420
Nucleotide excision repair
vcm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vcm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VCM66_0108 (polI)
03410 Base excision repair
VCM66_0108 (polI)
03420 Nucleotide excision repair
VCM66_0108 (polI)
03440 Homologous recombination
VCM66_0108 (polI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcm03032
]
VCM66_0108 (polI)
03400 DNA repair and recombination proteins [BR:
vcm03400
]
VCM66_0108 (polI)
Enzymes [BR:
vcm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VCM66_0108 (polI)
DNA replication proteins [BR:
vcm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
VCM66_0108 (polI)
DNA repair and recombination proteins [BR:
vcm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
VCM66_0108 (polI)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VCM66_0108 (polI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
ACP04444
UniProt:
C3LPV0
LinkDB
All DBs
Position
I:103063..105867
Genome browser
AA seq
934 aa
AA seq
DB search
MAHIPDNPLILIDGSSYLYRAFHAYPGTMSNGEIPTNAIYGVVNMIRSMMRQFASDRMAV
IFDAKGKTFRDEMYDQYKAHRPPMPDELRCQVEPLHQVIRAMGLPLLAIEGVEADDVIGT
LARQASQAGMPVLISTGDKDMAQLVDDNITLINTMTNVVLDREGVIEKFGIPPELIIDYL
ALMGDKVDNIPGVPGVGEKTATALLQGIGGLEALYANLDKIAALGFRGSKTMAQKLEENR
GNAKLSYQLATIKCDVELEESPQTLLKQTPDRDALMSLYGKLAFKSWLTELLDGGTGIVT
ADEQTKTSSVTVSTAATHAAAIPESPAAHIDRSQYQTILNEQDFQLWLEKLKQAELFAFD
TETDNLDYMVANLVGMSFAVAEGEAAYLPVAHDYLDAPQQLERDWVIAQLKPLLEDESKA
KVGQNLKYDASVMARYGVELRGIRHDTMLQSYVYNSVGGKHDMDSLALRFLQHSCISFEQ
VAGKGKNQLTFNQIALEEAAQYAAEDADVTLRLHQRIHPLIEQDAKLEQVYREIEMPLVP
VLSRIERTGVMIDDMLLSAQSQEIALRLDQLEQNAYELAGQPFNLSSPKQLQTILFEQMK
LPVLQKTPSGTPSTNEEVLQELALDYPLPKVLIEYRGLAKLKSTYTDKLPKMINPSTGRV
HTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFVAPHGWKIMAVDYSQIELRIMA
HLSGDQALLDAFRDGKDIHAATAAEIIGVPIDQVSSEQRRRAKAVNFGLIYGMSAFGLAK
QLGIPRGEAQEYMDKYFERYPGVMQYMEDTRSRAAQLGYVETIFGRRLHLPEITSRNAMR
RKAAERAAINAPMQGTAADIIKKAMLLVDEWIEREGDGRVKLLMQVHDELVFEVKESSLS
EIESKVQQLMESAAELAVPLVAEAGHGDNWEQAH
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggctcatatacctgacaatccattgattttgatcgacggctcctcttacctttatcgc
gcatttcatgcttacccgggcaccatgagtaatggtgaaatcccaaccaacgccatctat
ggtgtggtaaacatgattcgcagcatgatgcgccagttcgcttcggatcgcatggcggtg
atttttgatgccaagggaaaaaccttccgtgatgagatgtacgatcaatacaaggctcat
cgtcctcctatgccagatgagttgcgctgtcaggttgaacctttacaccaagttattcgc
gctatgggtttaccgctgttggcgattgaaggtgtagaagctgacgatgtgattggtacg
ttggcgcgccaagcctcacaagctggtatgcctgttttgatcagtaccggcgataaagat
atggcgcagttggtggatgataatattaccctgatcaataccatgaccaacgtcgtgctg
gatcgcgaaggtgtgattgaaaaattcggtatcccgccagagcttattatcgactacctc
gccttgatgggtgataaagtggataacattccgggcgtacctggggtgggtgaaaaaacc
gcgaccgcacttttgcaagggattggcggcttagaagcgctgtacgccaacctcgataaa
atcgctgctttaggcttccgtggctcaaaaaccatggcacaaaagctggaagagaaccgc
ggtaatgccaagctttcttatcaactcgccaccatcaaatgtgatgtcgagcttgaggaa
tctccgcaaaccctgctaaagcaaacgccagatcgagatgcgttgatgtcgctctacggt
aagctcgcctttaaatcttggctgaccgaattgcttgatggtggtacaggtattgtgacg
gcggacgagcaaacgaaaacctcttcagttactgtttcaaccgcagcaactcatgcggct
gcgattcctgaaagccctgcggcccacatcgatcgcagccagtatcaaaccatcctaaac
gaacaagacttccagctttggttagagaagttaaaacaagccgagctgtttgcctttgat
acggaaaccgacaaccttgattacatggtcgccaatttggtggggatgtcgtttgcagtt
gccgaaggtgaagcggcttatctgccagttgcgcacgattatctggatgcgccgcagcag
ttggagcgcgactgggtgattgcccagctaaaacctctgcttgaagatgaaagcaaagcc
aaagtgggccaaaacctcaaatacgatgcgagcgtgatggcgcgctacggcgttgagctg
cgtggtattcgccatgacactatgctgcaatcctacgtctataacagcgtgggcggcaaa
catgatatggatagtttagcgctgcgttttttacagcacagctgtatctcgtttgaacaa
gtggcaggtaagggtaagaaccagctcacctttaaccaaatcgctttagaagaagcggca
caatacgcggcagaagatgcggatgtgacgttgcgtctgcatcagcgaattcatccgttg
attgagcaagacgctaagcttgagcaagtgtatcgcgaaatcgaaatgccgctggtacct
gtgctatcacgtattgaacgtacgggcgtgatgatcgacgacatgctgctcagtgcccaa
tcgcaagaaattgcgttacgtttagatcaattagaacaaaatgcttatgagttggcaggt
cagccgttcaacttaagctcgccgaagcagctacaaaccattttgtttgagcagatgaag
ctgcctgtcttgcaaaaaacgccatccggtaccccttcaaccaatgaagaagtgttgcaa
gagctggctttggattacccactgcccaaggttctgattgagtaccgcggtctggccaaa
ctcaaatcgacctataccgataagttgccgaagatgattaacccaagtacagggcgcgtg
catacttcctatcatcaagcagtgacggccactgggcgtctctcctccactgatcctaac
ttgcagaacattccagtgcgtaatgaagaaggacgccgtattcgccaagcgtttgttgct
ccgcatggttggaaaatcatggcggtcgactactcgcaaatcgagctgcgcatcatggcg
cacctgtcgggcgatcaggcgttattggatgctttccgtgatgggaaagatatccatgcg
gcgacagcagcagaaatcattggtgtgccgattgatcaagtgagcagtgagcagcgtcgc
cgagcgaaagcggtgaactttggtttgatctacggcatgagtgcgtttggtctggcaaaa
cagctcggtattccacgcggtgaagcacaagagtatatggataaatactttgagcgttat
cccggcgtgatgcagtacatggaagatacgcgtagccgtgctgcacaattgggttatgtc
gaaaccatcttcggtcgtcgcttacatttgccggaaatcacctcacgtaacgctatgcgt
cgcaaagcggctgagcgggcagcgatcaacgcaccgatgcaaggcaccgcggcagacatc
atcaaaaaagccatgttgttggtggatgagtggattgagcgggaaggtgatggccgagtc
aaattgctgatgcaagtacacgatgaattggtctttgaagttaaagagtcatctttatcc
gaaattgaaagtaaagtacaacagctgatggagtcagcggccgagcttgcagtaccttta
gtggccgaagccggccacggcgacaactgggagcaggcgcactag
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