Vibrio cholerae O1 M66-2: VCM66_0125
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Entry
VCM66_0125 CDS
T00891
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
vcm
Vibrio cholerae O1 M66-2
Pathway
vcm00300
Lysine biosynthesis
vcm00470
D-Amino acid metabolism
vcm01100
Metabolic pathways
vcm01110
Biosynthesis of secondary metabolites
vcm01120
Microbial metabolism in diverse environments
vcm01230
Biosynthesis of amino acids
Module
vcm_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vcm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VCM66_0125 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VCM66_0125 (lysA)
Enzymes [BR:
vcm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
VCM66_0125 (lysA)
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Paralog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF1955
Motif
Other DBs
NCBI-ProteinID:
ACP04461
UniProt:
C3LPW7
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All DBs
Position
I:119194..120447
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AA seq
417 aa
AA seq
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MDYFNYQEDGQLWAEQVPLADLANQYGTPLYVYSRATLERHWHAFDKSVGDYPHLICYAV
KANSNLGVLNTLARLGSGFDIVSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKI
KCFNVESEPELQRLNKVAGELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAA
QVYRLAHSLPNLDVHGIDCHIGSQLTALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGG
LGVVYRDELPPQPSEYAKALLDRLERHRDLELIFEPGRAIAANAGVLVTKVEFLKHTEHK
NFAIIDAAMNDLIRPALYQAWQDIIPLRPRQGEAQTYDLVGPVCETSDFLGKDRDLVLQE
GDLLAVRSSGAYGFTMSSNYNTRPRVAEVMVDGNKTYLVRQREELSSLWALESVLPE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
ttggattacttcaattatcaggaagatggtcagttgtgggctgagcaagttccactcgcc
gatttggcaaaccagtacggtacaccgctttatgtttactcaagagcgacacttgagcgc
cattggcacgcgtttgataaatcagtcggtgattatcctcacctaatttgttatgcggtg
aaagccaactctaacttaggggtattgaatactttagctcgtttgggttcaggttttgat
atcgtctccgttggcgaattagagcgtgtattggccgccggtggtgacccaagcaaggtg
gtattctctggtgtgggtaaaaccgaagctgagatgaagcgcgccctgcaattgaagatc
aaatgctttaacgtggaatcggagcctgagctgcagcgcctgaataaagtggctggcgag
cttggtgttaaagcgccgatttcactgcgcatcaatcctgatgtggatgccaaaactcac
ccttacatttcaacgggtctacgtgataacaaatttggtatcacctttgaccgcgcagcg
caggtatatcgcttagcgcacagcttacccaacctcgatgtacatggtattgactgccat
atcggctcacagctaaccgctctcgcaccgtttattgatgcgactgaccgtttactggca
ctgattgattcgctgaaagcggaaggcattcatatccgccacttggatgtcggcggtggt
ttaggggtggtttatcgtgatgaactgcctccgcagccttcggaatacgccaaagcattg
ctggaccgcctagagcgccaccgcgatttagagctgatttttgaaccgggacgcgcgatt
gcggctaacgcgggagtattggtgactaaggtggagtttctcaaacacactgagcacaaa
aacttcgcgatcattgatgcggcgatgaacgatttgatccgcccggcgctataccaagcg
tggcaagacatcattccactgcgtccgcgccaaggcgaagcccaaacttatgatttggtt
ggcccggtgtgtgaaaccagtgatttcctagggaaagatcgcgacttagtgttgcaagag
ggggatttactggcggtgcgctcttctggtgcgtatgggtttaccatgtcgtcgaattac
aatacccgtccgcgagtggctgaagtcatggttgatggcaataaaacctatttggtgcgt
cagcgtgaagagcttagcagcttgtgggcgttagaatcggtattaccggagtaa
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