Vibrio cholerae O1 M66-2: VCM66_0126
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Entry
VCM66_0126 CDS
T00891
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
vcm
Vibrio cholerae O1 M66-2
Pathway
vcm00300
Lysine biosynthesis
vcm00470
D-Amino acid metabolism
vcm01100
Metabolic pathways
vcm01110
Biosynthesis of secondary metabolites
vcm01120
Microbial metabolism in diverse environments
vcm01230
Biosynthesis of amino acids
Module
vcm_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vcm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VCM66_0126 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VCM66_0126 (dapF)
Enzymes [BR:
vcm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
VCM66_0126 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
ACP04462
UniProt:
C3LPW8
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All DBs
Position
I:120417..121289
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AA seq
290 aa
AA seq
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MGVRIGITGVKLSSMHFHFSKMHGLGNDFMVVDCITQNVFFSPELIRRLADRHTGVGFDQ
LLVVEAPYDPESDFHYRIFNADGSEVEQCGNGARCFARFVRMKGLTNKYTIHVSTKKGKM
VLNVEEEDLITVNMGVPEFEPNKIPFRAKQSEKTYILRVGEHTLFCGAVSMGNPHVVTVV
DDIRTAAVETLGPLLESHERFPERVNAGFMQVVSRDEINLRVYERGAGETQACGSGACAA
VAVGILQGLLDEQVRVHLPGGELEIHWQGPGKPLYMTGPATHIYDGQISC
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
gtgggcgttagaatcggtattaccggagtaaagttatcttctatgcatttccatttttct
aaaatgcacggtttgggcaacgactttatggtcgtggactgtattacccaaaacgtcttc
ttctctccggaattgatccgccgtctggcggatcgccatacgggagtcggctttgatcaa
ttgttggtggttgaagcgccttacgatccagaatcggatttccattaccgcattttcaat
gccgatggcagcgaagtggagcagtgtggcaatggcgcgcgctgttttgcccgttttgta
cgcatgaaagggttaaccaacaagtacaccatccatgtcagtaccaagaaaggcaaaatg
gtactcaatgtggaagaggaagatctgatcaccgtgaacatgggtgtgccggagtttgag
ccgaacaagatcccatttcgcgccaaacagagcgaaaaaacctacattctgcgtgtcggt
gaacacaccttgttttgcggcgcggtgagtatgggcaacccgcatgtagtgactgtggtg
gacgatatccgcactgctgcggtagaaaccttagggccgcttttggaatcgcacgagcgt
ttccctgagcgcgtcaacgccggttttatgcaggtcgtgagccgtgatgagatcaatttg
cgcgtgtatgaacgtggtgcgggcgaaactcaagcttgtggcagtggcgcgtgcgccgcg
gttgcggtaggcattttgcaaggtttactggatgagcaagttcgtgtccatcttcccggt
ggtgagctggaaatccactggcaaggccccggcaaaccgctgtatatgacaggcccggct
actcatatctacgatggccaaatctcttgctaa
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