KEGG   Vibrio cholerae O1 M66-2: VCM66_0126
Entry
VCM66_0126        CDS       T00891                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
vcm  Vibrio cholerae O1 M66-2
Pathway
vcm00300  Lysine biosynthesis
vcm00470  D-Amino acid metabolism
vcm01100  Metabolic pathways
vcm01110  Biosynthesis of secondary metabolites
vcm01120  Microbial metabolism in diverse environments
vcm01230  Biosynthesis of amino acids
Module
vcm_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:vcm00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    VCM66_0126 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    VCM66_0126 (dapF)
Enzymes [BR:vcm01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     VCM66_0126 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: ACP04462
UniProt: C3LPW8
LinkDB
Position
I:120417..121289
AA seq 290 aa
MGVRIGITGVKLSSMHFHFSKMHGLGNDFMVVDCITQNVFFSPELIRRLADRHTGVGFDQ
LLVVEAPYDPESDFHYRIFNADGSEVEQCGNGARCFARFVRMKGLTNKYTIHVSTKKGKM
VLNVEEEDLITVNMGVPEFEPNKIPFRAKQSEKTYILRVGEHTLFCGAVSMGNPHVVTVV
DDIRTAAVETLGPLLESHERFPERVNAGFMQVVSRDEINLRVYERGAGETQACGSGACAA
VAVGILQGLLDEQVRVHLPGGELEIHWQGPGKPLYMTGPATHIYDGQISC
NT seq 873 nt   +upstreamnt  +downstreamnt
gtgggcgttagaatcggtattaccggagtaaagttatcttctatgcatttccatttttct
aaaatgcacggtttgggcaacgactttatggtcgtggactgtattacccaaaacgtcttc
ttctctccggaattgatccgccgtctggcggatcgccatacgggagtcggctttgatcaa
ttgttggtggttgaagcgccttacgatccagaatcggatttccattaccgcattttcaat
gccgatggcagcgaagtggagcagtgtggcaatggcgcgcgctgttttgcccgttttgta
cgcatgaaagggttaaccaacaagtacaccatccatgtcagtaccaagaaaggcaaaatg
gtactcaatgtggaagaggaagatctgatcaccgtgaacatgggtgtgccggagtttgag
ccgaacaagatcccatttcgcgccaaacagagcgaaaaaacctacattctgcgtgtcggt
gaacacaccttgttttgcggcgcggtgagtatgggcaacccgcatgtagtgactgtggtg
gacgatatccgcactgctgcggtagaaaccttagggccgcttttggaatcgcacgagcgt
ttccctgagcgcgtcaacgccggttttatgcaggtcgtgagccgtgatgagatcaatttg
cgcgtgtatgaacgtggtgcgggcgaaactcaagcttgtggcagtggcgcgtgcgccgcg
gttgcggtaggcattttgcaaggtttactggatgagcaagttcgtgtccatcttcccggt
ggtgagctggaaatccactggcaaggccccggcaaaccgctgtatatgacaggcccggct
actcatatctacgatggccaaatctcttgctaa

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