Vibrio cholerae O1 M66-2: VCM66_0184
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Entry
VCM66_0184 CDS
T00891
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
vcm
Vibrio cholerae O1 M66-2
Pathway
vcm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vcm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VCM66_0184 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcm03019
]
VCM66_0184 (recQ)
03400 DNA repair and recombination proteins [BR:
vcm03400
]
VCM66_0184 (recQ)
Enzymes [BR:
vcm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VCM66_0184 (recQ)
Messenger RNA biogenesis [BR:
vcm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
VCM66_0184 (recQ)
DNA repair and recombination proteins [BR:
vcm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
VCM66_0184 (recQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
ACP04517
LinkDB
All DBs
Position
I:187795..189657
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AA seq
620 aa
AA seq
DB search
MTLTLHSIDMTATLMAESSALFATPERVLHEVFGYQQFRVGQQEVIEAALAGRDSLVIMP
TGGGKSLCYQIPALVLEGVTLVISPLISLMKDQVDQLKANGVAAECVNSTLAREELIAIY
NRMHAGQLKLLYVSPERVLTAEFIERLSHLPLAMIAVDEAHCISQWGHDFRPEYASLGQL
KQRFPNVPVMALTATADDATRHDIMQRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVI
RYLETQRGQCGIIYCGSRKKVEMLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQ
IVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWL
RRMLDEKPDGAQKQVESHKLTAMGAFAEAQTCRRQVLLNYFGEYRDKPCGNCDICLDPPK
RFDATEEARKALSCVYRVNQNFGIGYVVEVLRGMQNIRIREHGHDKITTYGIGRDHSHDY
WVSIFRQLIHKGMLYQNITRNSTLQLTEEARPLLRGEMNIELAVPRLDTAARAAKSDKLS
GKNYDKKLFAKLRKLRKSIADDEGLPPYVVFSDATLIDMAEIMPTSYGEMLAVNGVGQRK
LEKYADPFLDLIQEHLTYHG
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgactcttactttgcactctatcgatatgaccgcgactttaatggctgaatcttctgct
ctctttgccactcctgaacgtgttttgcacgaggtgtttggctatcagcaatttcgcgtc
ggtcagcaagaggtgattgaggcggcgctggctgggcgtgatagcttggtcattatgccg
actggcggtggtaaatcgctctgttaccagatccctgcactggtgctggaaggggtcacg
ttagtgatttctcccctgatttcgctgatgaaagatcaggttgaccagcttaaagccaac
ggtgtggcggcagagtgcgtgaattccaccttggcgcgcgaggagttgatcgcgatttat
aaccgcatgcatgctggccagctcaagctgctgtatgtgtcgccagagcgggtattgacc
gccgagtttatcgaacggctcagccatctgccgttagccatgattgcggttgatgaagcg
cactgtatttcgcaatggggacacgattttcgccctgaatacgcctcattaggccagctt
aagcagcgtttcccgaatgtgccggtgatggcgctgactgcgactgcggatgacgcgacc
cgtcacgacattatgcagcgtttgcagctcaatgagccgcatcagtatctgggcagtttt
gatcgcccgaacatccgctacatgctggtggaaaaacataagccggtttcgcaagtgatt
cgctatttggaaacgcagcgcgggcagtgcggcatcatctattgtggtagccgtaaaaaa
gtggaaatgctcaccgaaaagctgtgcggcaaccacattcgcgccgccagttaccatgcc
gggatggatgccgatgaacgcgcttgggtgcaagaagcgtttcagcgtgatgacctgcaa
attgtggtggcgaccgtggcgtttggcatggggattaataaacccaacgtgcgctttgtg
gtgcattttgatattccacgcaacattgaatcctactatcaggaaactggccgcgcaggg
cgtgatggtctgcctgctgaagccatgatgctgtacgaccctgccgacatgaactggctg
cgccgcatgctggatgaaaagcccgatggcgcgcaaaaacaggttgaaagccacaaactc
accgccatgggcgcgtttgctgaagcgcaaacttgtcgccgccaagtgttgctcaattat
tttggcgaatatcgcgataagccatgtggtaactgcgatatctgcctcgacccgcccaag
cgttttgatgccacggaagaggcacgcaaagccttgtcgtgtgtctatcgcgtcaatcaa
aactttgggattggctatgtggtggaagtgctgcgcggcatgcagaatatccgtattcgc
gagcatggccacgacaaaatcaccacctacggcatcggccgcgatcacagccacgattac
tgggtgagtattttccgccaactgatccacaaaggcatgctctaccagaacatcacgcgt
aactcgacattgcaactgaccgaagaagcgcgccccttgctgcgcggtgaaatgaatatt
gagctggcggtaccgcgtttagataccgcggcgcgcgccgcgaaatccgacaaattgtcg
ggcaaaaactacgacaaaaagctgtttgccaaactgcgtaagctgcgtaaatcgatcgcc
gatgatgaaggcttaccaccgtatgtggtgttcagtgacgccaccttgattgatatggcg
gagatcatgccgacctcttacggcgaaatgttggcggtgaatggggttgggcagcgcaag
ctggaaaaatacgccgacccgtttttggatctgattcaggagcatttgacctatcatggc
tga
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