Vibrio cholerae O1 M66-2: VCM66_0221
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Entry
VCM66_0221 CDS
T00891
Symbol
kdtA
Name
(GenBank) 3-deoxy-D-manno-octulosonic-acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
vcm
Vibrio cholerae O1 M66-2
Pathway
vcm00540
Lipopolysaccharide biosynthesis
vcm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vcm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
VCM66_0221 (kdtA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vcm01005
]
VCM66_0221 (kdtA)
Enzymes [BR:
vcm01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
VCM66_0221 (kdtA)
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
VCM66_0221 (kdtA)
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
VCM66_0221 (kdtA)
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
VCM66_0221 (kdtA)
Lipopolysaccharide biosynthesis proteins [BR:
vcm01005
]
Lipid A
VCM66_0221 (kdtA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
TPR_Nup160_C
Glyco_trans_1_2
Epimerase_2
DUF5313
Motif
Other DBs
NCBI-ProteinID:
ACP04553
UniProt:
C3LQJ5
LinkDB
All DBs
Position
I:complement(223279..224598)
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AA seq
439 aa
AA seq
DB search
MDTHQSRRSREKIMLLRTLYTLLLTLAAPFLLYGLYRRRQGKPSVGKRWKEHFGITPPLK
TTTPPIWIHAASVGETLAVTPLIKQIKQRSPNTPILLTTTTPTGAEQAEKLADWVEHRYT
PIDFSFAVRGFLRRVRPCQLIIVETELWPNTLHTVAKAGLPITLVNARLSEKSYRGYQRI
HPFFNSMAKPLSLVLCQFADDAQRFIQLGVAETKIKITGSIKFDINITYEVIAQGEALRT
ALGKHRPVWIAASTHQGEDEIVLAAHQEILKQHPNALLILVPRHPERFAAVHKLAASLFS
VQTRSSQQTITSDTQVYLGDTMGEMLVLLGASDVCFMGGSLVGKKVGGHNLLEPAALAKP
IVTGPSFYNFTDITHALINAHACVIADQPETIAKQVNHWFSDAQERQQCGKNALAIVMQN
RGALENTLTELGFTKEFAQ
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggacacacatcaatcccgaagatctcgtgaaaaaataatgctgctccgtacgctttat
acgcttttactcactttagctgcaccgtttttactgtatggcctctatcgccgtagacag
gggaaacccagtgtcggaaaacgttggaaagagcatttcggcattaccccaccactaaaa
accacaaccccaccgatctggatccatgccgcgtcggtgggtgaaaccctagcggtaacg
ccactcataaaacaaattaagcaacgttcaccgaatacaccaattctgctgactaccacg
accccgacgggtgctgaacaagcggaaaaattggcggattgggttgagcatcgttatacc
ccgattgatttttcctttgcggtgagaggctttttgcgtcgtgtacgaccttgccaattg
atcatagtggaaacagaactgtggccaaatactctgcataccgttgccaaagcgggtttg
ccgattacactcgtgaatgcacgactttcggaaaaatcctatcgcggctatcagcgtatt
cacccgttctttaacagtatggcgaaacctctcagcctagtgttatgtcaatttgcagac
gatgcgcagcgttttattcagctcggtgtggctgagacaaaaatcaaaattaccggttcg
attaagtttgatatcaacatcacctatgaggtgattgctcaaggtgaagcgctcagaacg
gctttaggtaaacatcgtccagtctggatagccgccagcacacatcaaggtgaagatgaa
attgtgcttgcggcacatcaagaaatcctcaagcagcatcctaatgctttgttgatttta
gtgccgcgccatcctgaacgttttgcggcggtgcataagctcgcagctagccttttttca
gtgcaaactcgtagcagccaacaaaccataacctccgacactcaagtgtatctcggcgat
accatgggagagatgctggtcttgctcggcgcttctgatgtgtgttttatgggtggcagt
ttagtgggcaaaaaagtcggcgggcataatttgcttgaacctgctgcactggcaaaaccc
atcgttacaggccctagcttttacaactttaccgatatcacccacgcactcatcaatgca
catgcctgtgtgattgctgaccaaccagaaaccattgccaagcaggtgaaccattggttt
tctgatgctcaagaacggcagcaatgcggaaaaaatgccttagcgattgtaatgcaaaat
cgtggagctctcgaaaataccttgaccgaattaggttttactaaggaattcgcccaatga
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