Vibrio cholerae O1 M66-2: VCM66_0224
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Entry
VCM66_0224 CDS
T00891
Symbol
rfaF
Name
(GenBank) ADP-heptose--LPS heptosyltransferase II
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
vcm
Vibrio cholerae O1 M66-2
Pathway
vcm00540
Lipopolysaccharide biosynthesis
vcm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vcm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
VCM66_0224 (rfaF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vcm01005
]
VCM66_0224 (rfaF)
Enzymes [BR:
vcm01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
VCM66_0224 (rfaF)
Lipopolysaccharide biosynthesis proteins [BR:
vcm01005
]
Core region
VCM66_0224 (rfaF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Motif
Other DBs
NCBI-ProteinID:
ACP04556
UniProt:
C3LQJ8
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All DBs
Position
I:complement(226390..227430)
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AA seq
346 aa
AA seq
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MMKILVIGPSWVGDMVMSQSLYQRLKQQHPDAQIDVLAPAWCKPILERMPEVNQAIEMTI
GHGAFNLLGRRAIGCELRDNRYTHAIVLPNSAKSALIPWFANIPKRTGWKGEFRYGLLND
LRPDKRVFQYMVERYVALAHPKATMLADVSLEHCPRPKLVIDAIVQQAARQRLSLVSSRP
VIGLCPGAEFGPAKRWPDHYYAEVARYAIEQGFQVWLFGSAKDHSVTTQIQQALSEEQRE
YCANLAGETSLIEAVDLLAACHTVVSNDSGLMHVSAAVGCNIVAIYGSSSPKYTPPLTDK
LAVVHTEIECRPCFKRVCPLEHLNCLNQLKPAQVIKALDKFIGKDS
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
ttgatgaaaattcttgttattggcccttcttgggttggcgatatggtcatgtcacaaagc
ttgtaccagcgcctaaaacaacagcatcctgatgcacaaattgacgttttagctcctgct
tggtgtaagcccattttggaacgcatgcctgaggtcaatcaagcgattgaaatgaccata
ggtcacggtgctttcaatctgcttgggcgacgtgcgattgggtgtgagctgcgcgataat
cggtatacccatgccattgtgctgcctaattcagctaaatcagccttgatcccttggttt
gctaacattccaaaacgtaccggctggaaaggggaatttcgctacggcttactcaatgat
ttgcgcccagataagcgtgttttccaatatatggtggaaaggtatgttgctttggctcac
ccaaaagccacaatgcttgccgatgtttcgttagaacattgcccaagacctaaactcgtc
atcgacgccatcgtgcagcaagccgctcgacagcgactcagcttagtctcatcacgtccc
gtcattggactctgtcctggtgcagaatttggccccgcgaaacgctggcctgatcattac
tacgctgaagtcgctcgttatgctattgagcaaggttttcaagtatggctttttggctca
gcaaaagatcactccgtcaccacccaaattcaacaggctttaagtgaagaacagcgggaa
tactgcgccaatctcgccggagaaacctccctcatcgaagccgttgatcttcttgcagct
tgccatactgtggtcagtaacgattctggtttaatgcacgtttcagccgctgttggttgt
aacattgtggcaatttatggttcaagctctcccaaatatacaccaccactgacggataaa
ctggcagtcgtacatacagagatcgaatgtcgtccgtgctttaagcgagtatgtccgtta
gaacatttaaattgcttaaatcaactaaaacctgcacaagtcattaaagctttagataaa
tttattggaaaagattcatga
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