Vibrio cholerae O1 M66-2: VCM66_0503
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Entry
VCM66_0503 CDS
T00891
Symbol
alaS
Name
(GenBank) alanyl-tRNA synthetase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
vcm
Vibrio cholerae O1 M66-2
Pathway
vcm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vcm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
VCM66_0503 (alaS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vcm01007
]
VCM66_0503 (alaS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcm03016
]
VCM66_0503 (alaS)
Enzymes [BR:
vcm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
VCM66_0503 (alaS)
Amino acid related enzymes [BR:
vcm01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
VCM66_0503 (alaS)
Transfer RNA biogenesis [BR:
vcm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
VCM66_0503 (alaS)
Prokaryotic type
VCM66_0503 (alaS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
DHHA1
tRNA_SAD
TMF_DNA_bd
Motif
Other DBs
NCBI-ProteinID:
ACP04828
UniProt:
C3LS35
LinkDB
All DBs
Position
I:533971..536553
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AA seq
860 aa
AA seq
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MFMSTDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYT
RATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQ
LPKERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGP
CTEIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGI
ERISAIMQGVHSNYEIDVFQTLIKAAADAIGYQDLTNQSLRVVADHIRSCAFLIVDGVMP
SNEGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELKKQQALVEKVLR
IEEENFGRTLDRGMSILNDALDQLSGQVLDGETVFKLYDTYGFPADLTNDVARERGFSID
EAGFEQAMEEQRQRAREAGQFGTDYNSLIKSATNTEFCGYTASRGQSVVREMFVEGAEVS
TLSAGDKAIIVLDNTPFYAESGGQCGDTGVLKTDAGIFHVEDTQKLGNAIAHHGVIAQGV
LATGDQVDAIVDEKRRAAISLNHSATHLLHAALRKVLGEHVAQKGSLVRAETLRFDFSHL
EAMTAAEIKEVERLVNQEVRRNHSIETNIMNIDEAKAKGAMALFGEKYDDQVRVLSMGDF
STELCGGIHASNTGDIGLFKIISEGGIAAGIRRIEAVTGEGALDYLDAQQAQHDAKVSEM
AAKAKLLEKEIQQLKDKLAAKESAGLINQVKQIAGVNVLVAQLNGADNKALRGMVDDLKN
QLSSGIIMLGNVAEGKVGLIAGVTNDLTNKVKAGELVNMVALQVGGKGGGRPDMAQAGGT
DAHALPSALESVDAWIAERL
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgtttatgagcacggatgaggtgcgccgcgcgttcctctcattctttgaaagcaaaggt
caccaaattgtagaaagttcttctctggtgcctgctaacgatccgaccctgttgtttacc
aacgcagggatgaaccaatttaaagactgtttcttgggcttggaaaagcgcgcctacact
cgcgccacgaccgctcaacgttgtgtccgcgcgggcggtaagcacaacgacctagaaaac
gtcggtttcaccgcacgtcaccacactttcttcgaaatgctgggtaacttcagtttcggt
gactatttcaaagaagatgcgatccagtatgcatgggagtttctgactgacgttctgcaa
ctgccgaaagagcgcttgttagtcacggtttatgaaaccgatgacgaagcctttgatatt
tggaataaaaaagtcggcattcctgctgaccgcattattcgtatcggcgataaaaaaggt
ggcaagaagttcgattcggataacttctggcagatgggtgacaccggtccttgcggtcca
tgtactgaaatcttctacgaccacggtgaccacatttggggtggacctccaggctcacct
gaggaagatggcgatcgtttcatcgaaatctggaacaacgttttcatgcagttcaaccgt
catgcggatggcacgatggagccgctacctaagccgtctgtggacacgggcatgggtatt
gagcgtatttccgcgatcatgcaaggcgtgcactccaactacgaaatcgacgtattccaa
acgctgatcaaagcagccgcagacgcaattggttaccaagatctgactaatcagtctctg
cgcgttgtcgcggatcacatccgttcatgtgcctttttgattgtggatggcgtgatgccg
tctaacgaaggtcgtggttatgtactgcgtcgtatcattcgtcgtgccgttcgtcatggc
aataagctcggtgcgcaaggtgcattcttccacaagttggtgggaccattggcggaagtg
atgggtactgcaggcgttgagctgaaaaagcagcaagctctggttgaaaaagtgctacgt
atcgaagaagaaaactttggacgtacgctggatcgcggcatgagcattctgaatgacgcg
ctggatcaactatcaggccaagtgctggatggtgaaaccgtcttcaaactctacgacacc
tacggcttccctgcggatttaaccaatgatgtggcgcgtgagcgtggctttagcattgat
gaagcgggttttgaacaagcgatggaagagcagcgtcaacgcgctcgtgaggctggccaa
tttggtacggattataattcgctgatcaaatccgccaccaataccgaattctgcggttac
acggcgagtcgtggccaaagtgtggttcgcgaaatgttcgtggagggcgcggaagtttct
acgctgtcagctggtgataaagccatcatcgtactagacaacacgccattctacgcagaa
tcaggtggtcaatgcggcgatactggcgttttgaaaaccgacgcaggtattttccatgtt
gaagatactcaaaaattaggtaacgcgattgcgcatcacggtgtgatcgcccaaggcgta
ttggcgacaggcgatcaggtggatgccatcgtcgatgaaaagcgccgtgcggcaatttcg
ctgaaccactcggcgactcacttgttgcatgctgcactacgtaaagtgctgggtgaacac
gtggcgcagaaaggctctctagtgcgtgctgaaacactgcgttttgacttctcacatctg
gaagcgatgaccgctgcagagattaaagaagtagaacgtttagtgaaccaagaagttcgt
cgtaaccacagtatcgaaaccaacatcatgaatattgatgaagcgaaagcgaaaggtgcg
atggcgctgtttggtgagaaatatgacgaccaagttcgtgtgctctcaatgggagatttc
tcaactgagctgtgtggtggtatccacgcgagcaacacgggtgatattggtctgtttaag
atcatctctgaaggtggtattgctgcgggtattcgccgtattgaagcggtgactggtgaa
ggcgcattagattacctcgatgcacagcaagcacagcatgatgccaaagtgtctgaaatg
gcggcaaaagccaaactgctggagaaagagatccaacagttgaaagataagctggcggcg
aaagagagcgcgggtcttatcaaccaagttaagcagatcgcgggtgttaacgtactggtt
gcgcagctcaacggtgcagacaacaaagcgctacgtggcatggtagatgatctcaaaaac
caattaagcagcggcatcatcatgctgggtaatgtggctgaaggcaaagttggcctaatt
gcgggcgtaaccaacgatttgaccaataaagtcaaagcgggtgagctggtcaacatggtc
gcactacaagtcggtggtaagggtggtggccgccctgacatggctcaagctggagggaca
gatgctcacgctctgccatcggccttagagtctgtcgacgcttggattgccgagcgtcta
taa
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