Vibrio cholerae O1 M66-2: VCM66_0518
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Entry
VCM66_0518 CDS
T00891
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
vcm
Vibrio cholerae O1 M66-2
Pathway
vcm02024
Quorum sensing
vcm03060
Protein export
vcm03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vcm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
VCM66_0518 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
VCM66_0518 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VCM66_0518 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vcm02044
]
VCM66_0518 (ffh)
Enzymes [BR:
vcm01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
VCM66_0518 (ffh)
Secretion system [BR:
vcm02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
VCM66_0518 (ffh)
Eukaryotic Sec-SRP protein
VCM66_0518 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
Zeta_toxin
cobW
AAA_30
KTI12
T2SSE
AAA_31
AAA_24
AAA_33
Helicase_RecD
AAA_19
Mg_chelatase
AAA_18
APS_kinase
GlnD_UR_UTase
AAA_16
AAA_14
ATP_bind_1
YqeC
KAP_NTPase
DUF3867
Rad17
TsaE
Thymidylate_kin
Motif
Other DBs
NCBI-ProteinID:
ACP04843
UniProt:
C3LS50
LinkDB
All DBs
Position
I:552112..553497
Genome browser
AA seq
461 aa
AA seq
DB search
MFENLTDRLSKTLKNISGKGRLTEDNIKDTLREVRMALLEADVALPVVRDFVNRVKEGAV
GVEVSKSLTPGQEFIKIVRQQLEAVMGESNEALNLAAQPPAVILMAGLQGAGKTTSVGKL
SKLLKERDKKKVLVVSADVYRPAAIKQLETLANDLGVDFFPSTPDQKPIDIANAAIDHAK
KKFYDVLIVDTAGRLAIDEQMMAEIQALHKAINPVETLFVVDAMTGQDAANTAKAFGDAL
PLTGVILTKVDGDARGGAALSVRHITGKPIKFIGVGEKTDALEPFHPDRIASRILGMGDV
LSLIEDLQRNVDQEKAEKLAKKFKEKKGFDLEDFREQLGQMKNMGGMMGMLDKLPGMSQL
PADMKDKVDDRVFKQMEAIINSMTMKERQNPDLIKGSRKKRIAAGSGTQVQDVNRLLKQF
TQMQKMMKKMQQGGMKGMMRNMQGLMGGGGRGGFGGGFFGR
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaatttaaccgatcgattgtccaaaacgctgaaaaatatcagcggcaaaggt
cgtcttactgaagacaacattaaagataccctgcgcgaagtgcgcatggcgctgttagag
gcggacgttgcgctgcctgtcgttcgtgatttcgtcaatcgcgttaaagaaggcgcggtg
ggggtcgaggtttccaaatctctgactccgggtcaagagttcatcaaaatcgtccgccag
caacttgaagctgtgatgggcgaatccaacgaagcgttgaatcttgccgctcagcctcca
gcggttattttgatggctggtttgcaaggtgcgggtaaaaccacatccgtaggcaaactc
tctaagctcctaaaagagcgtgataagaagaaagtgttggtggtttccgccgacgtgtat
cgcccagcggcgatcaagcagctcgaaacattagccaatgatttaggcgttgatttcttc
ccgtccacaccggatcaaaaaccgattgatatcgctaacgctgcaattgatcacgctaag
aagaaattctacgacgtactgattgtcgataccgcaggtcgtttggcgattgatgagcag
atgatggcggagatccaagcgctgcataaagcgatcaatccggttgaaaccctgttcgtg
gtcgatgccatgacgggtcaagatgccgccaataccgcgaaagcgtttggtgatgcattg
ccactgaccggggtgattctaaccaaggtcgatggtgatgcccgtggcggtgcggcgttg
tcggtacgccatattaccggtaaaccgattaaatttatcggtgtcggcgagaaaaccgat
gccttagagcctttccatccggatcgtattgcttcacgcattcttggtatgggcgatgta
ctgtcgctgatcgaagatctgcagcgcaatgttgaccaagagaaagccgaaaaactcgcg
aaaaaattcaaagagaagaaaggctttgatttagaagactttcgtgagcagttaggtcag
atgaaaaacatgggcggcatgatggggatgctcgataaactgcccggaatgtctcaactg
cctgcggatatgaaagacaaagtggatgatcgcgttttcaaacagatggaagccatcatc
aactcaatgaccatgaaagagcgtcaaaacccagacctcatcaaaggctcacgcaaaaag
cggattgctgcgggttccggtacccaagtgcaagacgtaaaccgcctgctcaagcaattt
acccagatgcagaagatgatgaagaaaatgcaacaaggtggcatgaaaggcatgatgcgt
aacatgcaaggcctgatgggcggcggtggccgtggtggtttcggcggcggtttcttcggt
cgttaa
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